Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
FOXR1Q6PIV2 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27.57■■■□□ 2
FOXR1Q6PIV2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC27.56■■■□□ 2
FOXR1Q6PIV2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.55■■■□□ 2
FOXR1Q6PIV2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
FOXR1Q6PIV2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
FOXR1Q6PIV2 SETD8P1-201ENST00000623146 1180 ntBASIC27.55■■■□□ 2
FOXR1Q6PIV2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.55■■■□□ 2
FOXR1Q6PIV2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
FOXR1Q6PIV2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.54■■■□□ 2
FOXR1Q6PIV2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
FOXR1Q6PIV2 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.52■■■□□ 2
FOXR1Q6PIV2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
FOXR1Q6PIV2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
FOXR1Q6PIV2 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
FOXR1Q6PIV2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
FOXR1Q6PIV2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
FOXR1Q6PIV2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
FOXR1Q6PIV2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.48■■□□□ 1.99
FOXR1Q6PIV2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.47■■□□□ 1.99
FOXR1Q6PIV2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.47■■□□□ 1.99
FOXR1Q6PIV2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC27.46■■□□□ 1.99
FOXR1Q6PIV2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.99
FOXR1Q6PIV2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.45■■□□□ 1.98
FOXR1Q6PIV2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
FOXR1Q6PIV2 AC136428.2-201ENST00000563187 214 ntBASIC27.44■■□□□ 1.98
FOXR1Q6PIV2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
FOXR1Q6PIV2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
FOXR1Q6PIV2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
FOXR1Q6PIV2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
FOXR1Q6PIV2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
FOXR1Q6PIV2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC27.39■■□□□ 1.98
FOXR1Q6PIV2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.97
FOXR1Q6PIV2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.38■■□□□ 1.97
FOXR1Q6PIV2 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.38■■□□□ 1.97
FOXR1Q6PIV2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
FOXR1Q6PIV2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
FOXR1Q6PIV2 AC120057.4-201ENST00000624722 1615 ntBASIC27.36■■□□□ 1.97
FOXR1Q6PIV2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
FOXR1Q6PIV2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
FOXR1Q6PIV2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
FOXR1Q6PIV2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
FOXR1Q6PIV2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.33■■□□□ 1.97
FOXR1Q6PIV2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.33■■□□□ 1.96
FOXR1Q6PIV2 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
FOXR1Q6PIV2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
FOXR1Q6PIV2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
FOXR1Q6PIV2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
FOXR1Q6PIV2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.31■■□□□ 1.96
FOXR1Q6PIV2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
FOXR1Q6PIV2 RPS2P35-201ENST00000443417 897 ntBASIC27.31■■□□□ 1.96
FOXR1Q6PIV2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
FOXR1Q6PIV2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.3■■□□□ 1.96
FOXR1Q6PIV2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
FOXR1Q6PIV2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
FOXR1Q6PIV2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC27.3■■□□□ 1.96
FOXR1Q6PIV2 SUZ12P1-203ENST00000578195 985 ntBASIC27.3■■□□□ 1.96
FOXR1Q6PIV2 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
FOXR1Q6PIV2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC27.29■■□□□ 1.96
FOXR1Q6PIV2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
FOXR1Q6PIV2 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
FOXR1Q6PIV2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC27.28■■□□□ 1.96
FOXR1Q6PIV2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
FOXR1Q6PIV2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
FOXR1Q6PIV2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
FOXR1Q6PIV2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
FOXR1Q6PIV2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.27■■□□□ 1.96
FOXR1Q6PIV2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
FOXR1Q6PIV2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
FOXR1Q6PIV2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC27.26■■□□□ 1.96
FOXR1Q6PIV2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
FOXR1Q6PIV2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
FOXR1Q6PIV2 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
FOXR1Q6PIV2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
FOXR1Q6PIV2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.25■■□□□ 1.95
FOXR1Q6PIV2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
FOXR1Q6PIV2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
FOXR1Q6PIV2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
FOXR1Q6PIV2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.25■■□□□ 1.95
FOXR1Q6PIV2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
FOXR1Q6PIV2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
FOXR1Q6PIV2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
FOXR1Q6PIV2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
FOXR1Q6PIV2 AC142086.6-201ENST00000621154 1765 ntBASIC27.22■■□□□ 1.95
FOXR1Q6PIV2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
FOXR1Q6PIV2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
FOXR1Q6PIV2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.21■■□□□ 1.95
FOXR1Q6PIV2 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC27.21■■□□□ 1.95
FOXR1Q6PIV2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
FOXR1Q6PIV2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
FOXR1Q6PIV2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
FOXR1Q6PIV2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
FOXR1Q6PIV2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
FOXR1Q6PIV2 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC27.19■■□□□ 1.94
FOXR1Q6PIV2 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
FOXR1Q6PIV2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC27.18■■□□□ 1.94
FOXR1Q6PIV2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27.18■■□□□ 1.94
FOXR1Q6PIV2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC27.18■■□□□ 1.94
FOXR1Q6PIV2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
FOXR1Q6PIV2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms