Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Abcf1Q6P542 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.49■■□□□ 1.99
Abcf1Q6P542 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC27.49■■□□□ 1.99
Abcf1Q6P542 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Abcf1Q6P542 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC27.48■■□□□ 1.99
Abcf1Q6P542 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Abcf1Q6P542 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Abcf1Q6P542 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27.46■■□□□ 1.99
Abcf1Q6P542 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Abcf1Q6P542 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Abcf1Q6P542 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Abcf1Q6P542 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Abcf1Q6P542 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
Abcf1Q6P542 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
Abcf1Q6P542 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Abcf1Q6P542 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Abcf1Q6P542 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Abcf1Q6P542 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Abcf1Q6P542 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Abcf1Q6P542 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Abcf1Q6P542 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Abcf1Q6P542 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
Abcf1Q6P542 Zfp131-205ENSMUST00000223812 663 ntBASIC27.39■■□□□ 1.98
Abcf1Q6P542 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
Abcf1Q6P542 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC27.38■■□□□ 1.97
Abcf1Q6P542 Gm30346-201ENSMUST00000218641 1699 ntBASIC27.38■■□□□ 1.97
Abcf1Q6P542 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Abcf1Q6P542 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Abcf1Q6P542 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Abcf1Q6P542 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Abcf1Q6P542 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Abcf1Q6P542 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Abcf1Q6P542 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Abcf1Q6P542 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
Abcf1Q6P542 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Abcf1Q6P542 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Abcf1Q6P542 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Abcf1Q6P542 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Abcf1Q6P542 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Abcf1Q6P542 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27.29■■□□□ 1.96
Abcf1Q6P542 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Abcf1Q6P542 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Abcf1Q6P542 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC27.27■■□□□ 1.96
Abcf1Q6P542 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Abcf1Q6P542 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
Abcf1Q6P542 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Abcf1Q6P542 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Abcf1Q6P542 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Abcf1Q6P542 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Abcf1Q6P542 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.23■■□□□ 1.95
Abcf1Q6P542 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.23■■□□□ 1.95
Abcf1Q6P542 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Abcf1Q6P542 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Abcf1Q6P542 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Abcf1Q6P542 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Abcf1Q6P542 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Abcf1Q6P542 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.21■■□□□ 1.95
Abcf1Q6P542 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Abcf1Q6P542 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
Abcf1Q6P542 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
Abcf1Q6P542 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Abcf1Q6P542 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC27.2■■□□□ 1.94
Abcf1Q6P542 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Abcf1Q6P542 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC27.19■■□□□ 1.94
Abcf1Q6P542 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Abcf1Q6P542 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Abcf1Q6P542 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
Abcf1Q6P542 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC27.15■■□□□ 1.94
Abcf1Q6P542 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
Abcf1Q6P542 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.15■■□□□ 1.94
Abcf1Q6P542 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Abcf1Q6P542 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC27.12■■□□□ 1.93
Abcf1Q6P542 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC27.12■■□□□ 1.93
Abcf1Q6P542 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Abcf1Q6P542 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Abcf1Q6P542 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Abcf1Q6P542 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Abcf1Q6P542 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Abcf1Q6P542 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Abcf1Q6P542 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Abcf1Q6P542 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC27.1■■□□□ 1.93
Abcf1Q6P542 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Abcf1Q6P542 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
Abcf1Q6P542 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
Abcf1Q6P542 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Abcf1Q6P542 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
Abcf1Q6P542 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Abcf1Q6P542 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Abcf1Q6P542 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
Abcf1Q6P542 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Abcf1Q6P542 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Abcf1Q6P542 AC153890.1-201ENSMUST00000220021 2469 ntBASIC27.06■■□□□ 1.92
Abcf1Q6P542 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Abcf1Q6P542 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Abcf1Q6P542 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Abcf1Q6P542 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
Abcf1Q6P542 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC27.05■■□□□ 1.92
Abcf1Q6P542 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
Abcf1Q6P542 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.04■■□□□ 1.92
Abcf1Q6P542 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.04■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms