Protein–RNA interactions for Protein: Q6IEG0

SNRNP48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, humanhuman

Known RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48Q6IEG0 DUX4L29-201ENST00000425409 679 ntBASIC30.92■■■□□ 2.54
SNRNP48Q6IEG0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.92■■■□□ 2.54
SNRNP48Q6IEG0 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SNRNP48Q6IEG0 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
SNRNP48Q6IEG0 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
SNRNP48Q6IEG0 AC120057.4-201ENST00000624722 1615 ntBASIC30.91■■■□□ 2.54
SNRNP48Q6IEG0 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
SNRNP48Q6IEG0 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
SNRNP48Q6IEG0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
SNRNP48Q6IEG0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.88■■■□□ 2.53
SNRNP48Q6IEG0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SNRNP48Q6IEG0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SNRNP48Q6IEG0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SNRNP48Q6IEG0 HLA-V-202ENST00000446817 847 ntBASIC30.86■■■□□ 2.53
SNRNP48Q6IEG0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.86■■■□□ 2.53
SNRNP48Q6IEG0 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SNRNP48Q6IEG0 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SNRNP48Q6IEG0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.85■■■□□ 2.53
SNRNP48Q6IEG0 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
SNRNP48Q6IEG0 MIR6090-201ENST00000622481 60 ntBASIC30.85■■■□□ 2.53
SNRNP48Q6IEG0 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.84■■■□□ 2.53
SNRNP48Q6IEG0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SNRNP48Q6IEG0 AC108673.1-201ENST00000510422 1159 ntBASIC30.84■■■□□ 2.53
SNRNP48Q6IEG0 AC021231.2-201ENST00000594613 730 ntBASIC30.84■■■□□ 2.53
SNRNP48Q6IEG0 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
SNRNP48Q6IEG0 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SNRNP48Q6IEG0 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SNRNP48Q6IEG0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SNRNP48Q6IEG0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SNRNP48Q6IEG0 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SNRNP48Q6IEG0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
SNRNP48Q6IEG0 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.8■■■□□ 2.52
SNRNP48Q6IEG0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.79■■■□□ 2.52
SNRNP48Q6IEG0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.79■■■□□ 2.52
SNRNP48Q6IEG0 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.78■■■□□ 2.52
SNRNP48Q6IEG0 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SNRNP48Q6IEG0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
SNRNP48Q6IEG0 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.51
SNRNP48Q6IEG0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.75■■■□□ 2.51
SNRNP48Q6IEG0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
SNRNP48Q6IEG0 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.75■■■□□ 2.51
SNRNP48Q6IEG0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.74■■■□□ 2.51
SNRNP48Q6IEG0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.74■■■□□ 2.51
SNRNP48Q6IEG0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
SNRNP48Q6IEG0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SNRNP48Q6IEG0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SNRNP48Q6IEG0 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
SNRNP48Q6IEG0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
SNRNP48Q6IEG0 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
SNRNP48Q6IEG0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
SNRNP48Q6IEG0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.71■■■□□ 2.51
SNRNP48Q6IEG0 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
SNRNP48Q6IEG0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30.71■■■□□ 2.51
SNRNP48Q6IEG0 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SNRNP48Q6IEG0 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
SNRNP48Q6IEG0 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.69■■■□□ 2.5
SNRNP48Q6IEG0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
SNRNP48Q6IEG0 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
SNRNP48Q6IEG0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.64■■■□□ 2.5
SNRNP48Q6IEG0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
SNRNP48Q6IEG0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.63■■■□□ 2.49
SNRNP48Q6IEG0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.63■■■□□ 2.49
SNRNP48Q6IEG0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.63■■■□□ 2.49
SNRNP48Q6IEG0 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SNRNP48Q6IEG0 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
SNRNP48Q6IEG0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
SNRNP48Q6IEG0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.62■■■□□ 2.49
SNRNP48Q6IEG0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.61■■■□□ 2.49
SNRNP48Q6IEG0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SNRNP48Q6IEG0 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
SNRNP48Q6IEG0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SNRNP48Q6IEG0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.59■■■□□ 2.49
SNRNP48Q6IEG0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
SNRNP48Q6IEG0 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
SNRNP48Q6IEG0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
SNRNP48Q6IEG0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
SNRNP48Q6IEG0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SNRNP48Q6IEG0 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SNRNP48Q6IEG0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.54■■■□□ 2.48
SNRNP48Q6IEG0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.54■■■□□ 2.48
SNRNP48Q6IEG0 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SNRNP48Q6IEG0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.53■■■□□ 2.48
SNRNP48Q6IEG0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.51■■■□□ 2.47
SNRNP48Q6IEG0 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.47
SNRNP48Q6IEG0 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SNRNP48Q6IEG0 AL161658.1-201ENST00000623641 1967 ntBASIC30.5■■■□□ 2.47
SNRNP48Q6IEG0 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SNRNP48Q6IEG0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SNRNP48Q6IEG0 LINC01971-201ENST00000617888 1048 ntBASIC30.49■■■□□ 2.47
SNRNP48Q6IEG0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SNRNP48Q6IEG0 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SNRNP48Q6IEG0 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SNRNP48Q6IEG0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SNRNP48Q6IEG0 DUX4L11-201ENST00000611504 1267 ntBASIC30.47■■■□□ 2.47
SNRNP48Q6IEG0 DUX4L12-201ENST00000614593 1267 ntBASIC30.47■■■□□ 2.47
SNRNP48Q6IEG0 DUX4L14-201ENST00000621227 1267 ntBASIC30.47■■■□□ 2.47
SNRNP48Q6IEG0 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SNRNP48Q6IEG0 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
SNRNP48Q6IEG0 MIR3648-2-201ENST00000581792 180 ntBASIC30.46■■■□□ 2.47
SNRNP48Q6IEG0 MIR3648-1-201ENST00000615959 180 ntBASIC30.46■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms