Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhga7Q6DD96 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhga7Q6DD96 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhga7Q6DD96 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhga7Q6DD96 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhga7Q6DD96 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhga7Q6DD96 Gm24804-201ENSMUST00000174982 85 ntBASIC23.98■■□□□ 1.43
Pcdhga7Q6DD96 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Pcdhga7Q6DD96 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdhga7Q6DD96 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdhga7Q6DD96 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdhga7Q6DD96 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Pcdhga7Q6DD96 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
Pcdhga7Q6DD96 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.94■■□□□ 1.42
Pcdhga7Q6DD96 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Pcdhga7Q6DD96 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.92■■□□□ 1.42
Pcdhga7Q6DD96 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdhga7Q6DD96 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdhga7Q6DD96 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdhga7Q6DD96 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdhga7Q6DD96 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhga7Q6DD96 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhga7Q6DD96 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Pcdhga7Q6DD96 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.88■■□□□ 1.41
Pcdhga7Q6DD96 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Pcdhga7Q6DD96 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhga7Q6DD96 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhga7Q6DD96 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhga7Q6DD96 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhga7Q6DD96 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Pcdhga7Q6DD96 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhga7Q6DD96 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.85■■□□□ 1.41
Pcdhga7Q6DD96 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhga7Q6DD96 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.84■■□□□ 1.41
Pcdhga7Q6DD96 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdhga7Q6DD96 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.83■■□□□ 1.41
Pcdhga7Q6DD96 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdhga7Q6DD96 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdhga7Q6DD96 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Pcdhga7Q6DD96 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Pcdhga7Q6DD96 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhga7Q6DD96 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.8■■□□□ 1.4
Pcdhga7Q6DD96 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Pcdhga7Q6DD96 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Pcdhga7Q6DD96 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhga7Q6DD96 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhga7Q6DD96 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhga7Q6DD96 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.79■■□□□ 1.4
Pcdhga7Q6DD96 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhga7Q6DD96 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhga7Q6DD96 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhga7Q6DD96 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhga7Q6DD96 Gm16148-201ENSMUST00000119653 893 ntBASIC23.77■■□□□ 1.4
Pcdhga7Q6DD96 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhga7Q6DD96 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhga7Q6DD96 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhga7Q6DD96 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhga7Q6DD96 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
Pcdhga7Q6DD96 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhga7Q6DD96 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.75■■□□□ 1.39
Pcdhga7Q6DD96 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhga7Q6DD96 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhga7Q6DD96 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.74■■□□□ 1.39
Pcdhga7Q6DD96 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhga7Q6DD96 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.71■■□□□ 1.39
Pcdhga7Q6DD96 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhga7Q6DD96 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Pcdhga7Q6DD96 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhga7Q6DD96 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhga7Q6DD96 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhga7Q6DD96 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Pcdhga7Q6DD96 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhga7Q6DD96 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhga7Q6DD96 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.67■■□□□ 1.38
Pcdhga7Q6DD96 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.67■■□□□ 1.38
Pcdhga7Q6DD96 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhga7Q6DD96 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Pcdhga7Q6DD96 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhga7Q6DD96 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhga7Q6DD96 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhga7Q6DD96 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhga7Q6DD96 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhga7Q6DD96 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Pcdhga7Q6DD96 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhga7Q6DD96 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhga7Q6DD96 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhga7Q6DD96 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhga7Q6DD96 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhga7Q6DD96 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhga7Q6DD96 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Pcdhga7Q6DD96 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhga7Q6DD96 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhga7Q6DD96 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhga7Q6DD96 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhga7Q6DD96 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Pcdhga7Q6DD96 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.57■■□□□ 1.36
Pcdhga7Q6DD96 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhga7Q6DD96 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Pcdhga7Q6DD96 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhga7Q6DD96 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms