Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
Sdf4Q61112 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Sdf4Q61112 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Sdf4Q61112 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Sdf4Q61112 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Sdf4Q61112 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Sdf4Q61112 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.11■■□□□ 1.61
Sdf4Q61112 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.11■■□□□ 1.61
Sdf4Q61112 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Sdf4Q61112 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Sdf4Q61112 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Sdf4Q61112 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Sdf4Q61112 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.09■■□□□ 1.61
Sdf4Q61112 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Sdf4Q61112 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Sdf4Q61112 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Sdf4Q61112 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Sdf4Q61112 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Sdf4Q61112 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Sdf4Q61112 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.06■■□□□ 1.6
Sdf4Q61112 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Sdf4Q61112 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Sdf4Q61112 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
Sdf4Q61112 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
Sdf4Q61112 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.04■■□□□ 1.6
Sdf4Q61112 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.03■■□□□ 1.6
Sdf4Q61112 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.03■■□□□ 1.6
Sdf4Q61112 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.02■■□□□ 1.6
Sdf4Q61112 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC25.02■■□□□ 1.6
Sdf4Q61112 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.01■■□□□ 1.59
Sdf4Q61112 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Sdf4Q61112 Gm9397-201ENSMUST00000200125 605 ntBASIC25.01■■□□□ 1.59
Sdf4Q61112 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Sdf4Q61112 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Sdf4Q61112 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Sdf4Q61112 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Sdf4Q61112 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
Sdf4Q61112 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Sdf4Q61112 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Sdf4Q61112 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Sdf4Q61112 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Sdf4Q61112 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.95■■□□□ 1.58
Sdf4Q61112 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.94■■□□□ 1.58
Sdf4Q61112 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.94■■□□□ 1.58
Sdf4Q61112 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Sdf4Q61112 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.94■■□□□ 1.58
Sdf4Q61112 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Sdf4Q61112 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Sdf4Q61112 Gm45855-201ENSMUST00000212546 880 ntBASIC24.93■■□□□ 1.58
Sdf4Q61112 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.92■■□□□ 1.58
Sdf4Q61112 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Sdf4Q61112 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Sdf4Q61112 Gm24970-201ENSMUST00000175582 82 ntBASIC24.9■■□□□ 1.58
Sdf4Q61112 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.9■■□□□ 1.58
Sdf4Q61112 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Sdf4Q61112 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Sdf4Q61112 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.88■■□□□ 1.57
Sdf4Q61112 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Sdf4Q61112 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.86■■□□□ 1.57
Sdf4Q61112 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
Sdf4Q61112 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Sdf4Q61112 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Sdf4Q61112 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Sdf4Q61112 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.85■■□□□ 1.57
Sdf4Q61112 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.85■■□□□ 1.57
Sdf4Q61112 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Sdf4Q61112 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
Sdf4Q61112 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.83■■□□□ 1.57
Sdf4Q61112 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.56
Sdf4Q61112 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Sdf4Q61112 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.82■■□□□ 1.56
Sdf4Q61112 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.82■■□□□ 1.56
Sdf4Q61112 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Sdf4Q61112 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Sdf4Q61112 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Sdf4Q61112 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Sdf4Q61112 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Sdf4Q61112 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Sdf4Q61112 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Sdf4Q61112 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.79■■□□□ 1.56
Sdf4Q61112 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Sdf4Q61112 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.79■■□□□ 1.56
Sdf4Q61112 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Sdf4Q61112 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Sdf4Q61112 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.75■■□□□ 1.55
Sdf4Q61112 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.75■■□□□ 1.55
Sdf4Q61112 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Sdf4Q61112 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Sdf4Q61112 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Sdf4Q61112 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Sdf4Q61112 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Sdf4Q61112 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Sdf4Q61112 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Sdf4Q61112 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Sdf4Q61112 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
Sdf4Q61112 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Sdf4Q61112 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
Sdf4Q61112 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Sdf4Q61112 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Sdf4Q61112 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.67■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 137.8 ms