Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Vmn1r223Q5SSA0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vmn1r223Q5SSA0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vmn1r223Q5SSA0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Vmn1r223Q5SSA0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Vmn1r223Q5SSA0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.33■■□□□ 1
Vmn1r223Q5SSA0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
Vmn1r223Q5SSA0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
Vmn1r223Q5SSA0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.32■■□□□ 1
Vmn1r223Q5SSA0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vmn1r223Q5SSA0 Gm16148-201ENSMUST00000119653 893 ntBASIC21.31■■□□□ 1
Vmn1r223Q5SSA0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Vmn1r223Q5SSA0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vmn1r223Q5SSA0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vmn1r223Q5SSA0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vmn1r223Q5SSA0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.29■■□□□ 1
Vmn1r223Q5SSA0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vmn1r223Q5SSA0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Vmn1r223Q5SSA0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Vmn1r223Q5SSA0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Vmn1r223Q5SSA0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.27■□□□□ 0.99
Vmn1r223Q5SSA0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vmn1r223Q5SSA0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.26■□□□□ 0.99
Vmn1r223Q5SSA0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vmn1r223Q5SSA0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vmn1r223Q5SSA0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vmn1r223Q5SSA0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vmn1r223Q5SSA0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vmn1r223Q5SSA0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vmn1r223Q5SSA0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Vmn1r223Q5SSA0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.23■□□□□ 0.99
Vmn1r223Q5SSA0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vmn1r223Q5SSA0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vmn1r223Q5SSA0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Vmn1r223Q5SSA0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vmn1r223Q5SSA0 Amer2-203ENSMUST00000225247 2662 ntBASIC21.22■□□□□ 0.99
Vmn1r223Q5SSA0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vmn1r223Q5SSA0 Zfp131-205ENSMUST00000223812 663 ntBASIC21.2■□□□□ 0.98
Vmn1r223Q5SSA0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vmn1r223Q5SSA0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vmn1r223Q5SSA0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Vmn1r223Q5SSA0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Vmn1r223Q5SSA0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vmn1r223Q5SSA0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.17■□□□□ 0.98
Vmn1r223Q5SSA0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Vmn1r223Q5SSA0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Vmn1r223Q5SSA0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vmn1r223Q5SSA0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Vmn1r223Q5SSA0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vmn1r223Q5SSA0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Vmn1r223Q5SSA0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vmn1r223Q5SSA0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vmn1r223Q5SSA0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Vmn1r223Q5SSA0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vmn1r223Q5SSA0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vmn1r223Q5SSA0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vmn1r223Q5SSA0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vmn1r223Q5SSA0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Vmn1r223Q5SSA0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vmn1r223Q5SSA0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Vmn1r223Q5SSA0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vmn1r223Q5SSA0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Vmn1r223Q5SSA0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Vmn1r223Q5SSA0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Vmn1r223Q5SSA0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vmn1r223Q5SSA0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Vmn1r223Q5SSA0 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.06■□□□□ 0.96
Vmn1r223Q5SSA0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Vmn1r223Q5SSA0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.05■□□□□ 0.96
Vmn1r223Q5SSA0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.05■□□□□ 0.96
Vmn1r223Q5SSA0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vmn1r223Q5SSA0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.04■□□□□ 0.96
Vmn1r223Q5SSA0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Vmn1r223Q5SSA0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Vmn1r223Q5SSA0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Vmn1r223Q5SSA0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Vmn1r223Q5SSA0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Vmn1r223Q5SSA0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Vmn1r223Q5SSA0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Vmn1r223Q5SSA0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.02■□□□□ 0.96
Vmn1r223Q5SSA0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vmn1r223Q5SSA0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vmn1r223Q5SSA0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21■□□□□ 0.95
Vmn1r223Q5SSA0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Vmn1r223Q5SSA0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vmn1r223Q5SSA0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.99■□□□□ 0.95
Vmn1r223Q5SSA0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vmn1r223Q5SSA0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.98■□□□□ 0.95
Vmn1r223Q5SSA0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.98■□□□□ 0.95
Vmn1r223Q5SSA0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Vmn1r223Q5SSA0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vmn1r223Q5SSA0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vmn1r223Q5SSA0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.97■□□□□ 0.95
Vmn1r223Q5SSA0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Vmn1r223Q5SSA0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vmn1r223Q5SSA0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vmn1r223Q5SSA0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vmn1r223Q5SSA0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Vmn1r223Q5SSA0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Vmn1r223Q5SSA0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms