Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.92■□□□□ 0.78
Trav6-3Q5R1E6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav6-3Q5R1E6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav6-3Q5R1E6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav6-3Q5R1E6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Trav6-3Q5R1E6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trav6-3Q5R1E6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trav6-3Q5R1E6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav6-3Q5R1E6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Trav6-3Q5R1E6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.88■□□□□ 0.77
Trav6-3Q5R1E6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav6-3Q5R1E6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.87■□□□□ 0.77
Trav6-3Q5R1E6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav6-3Q5R1E6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav6-3Q5R1E6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.87■□□□□ 0.77
Trav6-3Q5R1E6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Trav6-3Q5R1E6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.87■□□□□ 0.77
Trav6-3Q5R1E6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav6-3Q5R1E6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav6-3Q5R1E6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav6-3Q5R1E6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav6-3Q5R1E6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trav6-3Q5R1E6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav6-3Q5R1E6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.83■□□□□ 0.76
Trav6-3Q5R1E6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.82■□□□□ 0.76
Trav6-3Q5R1E6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Trav6-3Q5R1E6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav6-3Q5R1E6 Gm24804-201ENSMUST00000174982 85 ntBASIC19.8■□□□□ 0.76
Trav6-3Q5R1E6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trav6-3Q5R1E6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Trav6-3Q5R1E6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav6-3Q5R1E6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trav6-3Q5R1E6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trav6-3Q5R1E6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trav6-3Q5R1E6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav6-3Q5R1E6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav6-3Q5R1E6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav6-3Q5R1E6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trav6-3Q5R1E6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Trav6-3Q5R1E6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trav6-3Q5R1E6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trav6-3Q5R1E6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trav6-3Q5R1E6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav6-3Q5R1E6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav6-3Q5R1E6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav6-3Q5R1E6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav6-3Q5R1E6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav6-3Q5R1E6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trav6-3Q5R1E6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav6-3Q5R1E6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav6-3Q5R1E6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav6-3Q5R1E6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav6-3Q5R1E6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav6-3Q5R1E6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav6-3Q5R1E6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav6-3Q5R1E6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trav6-3Q5R1E6 Gm16148-201ENSMUST00000119653 893 ntBASIC19.7■□□□□ 0.74
Trav6-3Q5R1E6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav6-3Q5R1E6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trav6-3Q5R1E6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav6-3Q5R1E6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trav6-3Q5R1E6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav6-3Q5R1E6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav6-3Q5R1E6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav6-3Q5R1E6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trav6-3Q5R1E6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav6-3Q5R1E6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trav6-3Q5R1E6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.64■□□□□ 0.73
Trav6-3Q5R1E6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav6-3Q5R1E6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav6-3Q5R1E6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav6-3Q5R1E6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav6-3Q5R1E6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav6-3Q5R1E6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav6-3Q5R1E6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav6-3Q5R1E6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav6-3Q5R1E6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trav6-3Q5R1E6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.61■□□□□ 0.73
Trav6-3Q5R1E6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trav6-3Q5R1E6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav6-3Q5R1E6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.6■□□□□ 0.73
Trav6-3Q5R1E6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav6-3Q5R1E6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trav6-3Q5R1E6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trav6-3Q5R1E6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trav6-3Q5R1E6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Trav6-3Q5R1E6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trav6-3Q5R1E6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav6-3Q5R1E6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trav6-3Q5R1E6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav6-3Q5R1E6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav6-3Q5R1E6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav6-3Q5R1E6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav6-3Q5R1E6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav6-3Q5R1E6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Trav6-3Q5R1E6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav6-3Q5R1E6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Trav6-3Q5R1E6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trav6-3Q5R1E6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav6-3Q5R1E6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms