Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim63Q38HM4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim63Q38HM4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.53■□□□□ 0.88
Trim63Q38HM4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Trim63Q38HM4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim63Q38HM4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim63Q38HM4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim63Q38HM4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim63Q38HM4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim63Q38HM4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim63Q38HM4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim63Q38HM4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim63Q38HM4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim63Q38HM4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Trim63Q38HM4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Trim63Q38HM4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim63Q38HM4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim63Q38HM4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim63Q38HM4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Trim63Q38HM4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim63Q38HM4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Trim63Q38HM4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim63Q38HM4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim63Q38HM4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim63Q38HM4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Trim63Q38HM4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim63Q38HM4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim63Q38HM4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Trim63Q38HM4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim63Q38HM4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Trim63Q38HM4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim63Q38HM4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim63Q38HM4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.43■□□□□ 0.86
Trim63Q38HM4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim63Q38HM4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim63Q38HM4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim63Q38HM4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Trim63Q38HM4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trim63Q38HM4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.39■□□□□ 0.85
Trim63Q38HM4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim63Q38HM4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.38■□□□□ 0.85
Trim63Q38HM4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim63Q38HM4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim63Q38HM4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim63Q38HM4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Trim63Q38HM4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim63Q38HM4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim63Q38HM4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Trim63Q38HM4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim63Q38HM4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim63Q38HM4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim63Q38HM4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim63Q38HM4 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim63Q38HM4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim63Q38HM4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim63Q38HM4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim63Q38HM4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Trim63Q38HM4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim63Q38HM4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim63Q38HM4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Trim63Q38HM4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Trim63Q38HM4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Trim63Q38HM4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim63Q38HM4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Trim63Q38HM4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim63Q38HM4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
Trim63Q38HM4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim63Q38HM4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.23■□□□□ 0.83
Trim63Q38HM4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Trim63Q38HM4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim63Q38HM4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim63Q38HM4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim63Q38HM4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim63Q38HM4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Trim63Q38HM4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Trim63Q38HM4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim63Q38HM4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim63Q38HM4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim63Q38HM4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim63Q38HM4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim63Q38HM4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim63Q38HM4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.19■□□□□ 0.82
Trim63Q38HM4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim63Q38HM4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim63Q38HM4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Trim63Q38HM4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim63Q38HM4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim63Q38HM4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim63Q38HM4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Trim63Q38HM4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim63Q38HM4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Trim63Q38HM4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim63Q38HM4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim63Q38HM4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim63Q38HM4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim63Q38HM4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.15■□□□□ 0.82
Trim63Q38HM4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim63Q38HM4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Trim63Q38HM4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim63Q38HM4 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms