Protein–RNA interactions for Protein: Q2VWQ2

Nell1, Protein kinase C-binding protein NELL1, mousemouse

Predictions only

Length 810 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nell1Q2VWQ2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Nell1Q2VWQ2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Nell1Q2VWQ2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Nell1Q2VWQ2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.25■■□□□ 1.47
Nell1Q2VWQ2 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.25■■□□□ 1.47
Nell1Q2VWQ2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.23■■□□□ 1.47
Nell1Q2VWQ2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Nell1Q2VWQ2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Nell1Q2VWQ2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Nell1Q2VWQ2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.22■■□□□ 1.47
Nell1Q2VWQ2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.22■■□□□ 1.47
Nell1Q2VWQ2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Nell1Q2VWQ2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Nell1Q2VWQ2 Gm7432-201ENSMUST00000210343 879 ntBASIC24.21■■□□□ 1.47
Nell1Q2VWQ2 Nkain2-201ENSMUST00000092602 558 ntBASIC24.21■■□□□ 1.47
Nell1Q2VWQ2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Nell1Q2VWQ2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.2■■□□□ 1.46
Nell1Q2VWQ2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Nell1Q2VWQ2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Nell1Q2VWQ2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Nell1Q2VWQ2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Nell1Q2VWQ2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Nell1Q2VWQ2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Nell1Q2VWQ2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Nell1Q2VWQ2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Nell1Q2VWQ2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Nell1Q2VWQ2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.16■■□□□ 1.46
Nell1Q2VWQ2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.15■■□□□ 1.46
Nell1Q2VWQ2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.15■■□□□ 1.46
Nell1Q2VWQ2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Nell1Q2VWQ2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Nell1Q2VWQ2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Nell1Q2VWQ2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Nell1Q2VWQ2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Nell1Q2VWQ2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.13■■□□□ 1.45
Nell1Q2VWQ2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.13■■□□□ 1.45
Nell1Q2VWQ2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Nell1Q2VWQ2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.1■■□□□ 1.45
Nell1Q2VWQ2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.1■■□□□ 1.45
Nell1Q2VWQ2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Nell1Q2VWQ2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Nell1Q2VWQ2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Nell1Q2VWQ2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Nell1Q2VWQ2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Nell1Q2VWQ2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Nell1Q2VWQ2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Nell1Q2VWQ2 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.07■■□□□ 1.44
Nell1Q2VWQ2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Nell1Q2VWQ2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Nell1Q2VWQ2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Nell1Q2VWQ2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Nell1Q2VWQ2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Nell1Q2VWQ2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
Nell1Q2VWQ2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.06■■□□□ 1.44
Nell1Q2VWQ2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Nell1Q2VWQ2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Nell1Q2VWQ2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Nell1Q2VWQ2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
Nell1Q2VWQ2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.03■■□□□ 1.44
Nell1Q2VWQ2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Nell1Q2VWQ2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Nell1Q2VWQ2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Nell1Q2VWQ2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24■■□□□ 1.43
Nell1Q2VWQ2 Gm11599-201ENSMUST00000118720 878 ntBASIC23.99■■□□□ 1.43
Nell1Q2VWQ2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Nell1Q2VWQ2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Nell1Q2VWQ2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.99■■□□□ 1.43
Nell1Q2VWQ2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Nell1Q2VWQ2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.99■■□□□ 1.43
Nell1Q2VWQ2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Nell1Q2VWQ2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Nell1Q2VWQ2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Nell1Q2VWQ2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Nell1Q2VWQ2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Nell1Q2VWQ2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Nell1Q2VWQ2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Nell1Q2VWQ2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
Nell1Q2VWQ2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Nell1Q2VWQ2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Nell1Q2VWQ2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.94■■□□□ 1.42
Nell1Q2VWQ2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Nell1Q2VWQ2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Nell1Q2VWQ2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Nell1Q2VWQ2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Nell1Q2VWQ2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Nell1Q2VWQ2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Nell1Q2VWQ2 Mir6538-201ENSMUST00000183713 110 ntBASIC23.91■■□□□ 1.42
Nell1Q2VWQ2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.9■■□□□ 1.42
Nell1Q2VWQ2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Nell1Q2VWQ2 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.89■■□□□ 1.41
Nell1Q2VWQ2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Nell1Q2VWQ2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Nell1Q2VWQ2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Nell1Q2VWQ2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Nell1Q2VWQ2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Nell1Q2VWQ2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Nell1Q2VWQ2 Gm11175-201ENSMUST00000116172 543 ntBASIC23.85■■□□□ 1.41
Nell1Q2VWQ2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.85■■□□□ 1.41
Nell1Q2VWQ2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Nell1Q2VWQ2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 212.9 ms