Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RSPO1Q2MKA7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RSPO1Q2MKA7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RSPO1Q2MKA7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
RSPO1Q2MKA7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC23.24■■□□□ 1.31
RSPO1Q2MKA7 AC097358.2-201ENST00000607541 1159 ntBASIC23.24■■□□□ 1.31
RSPO1Q2MKA7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.24■■□□□ 1.31
RSPO1Q2MKA7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.23■■□□□ 1.31
RSPO1Q2MKA7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.23■■□□□ 1.31
RSPO1Q2MKA7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RSPO1Q2MKA7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.23■■□□□ 1.31
RSPO1Q2MKA7 AL135925.1-201ENST00000605920 1701 ntBASIC23.22■■□□□ 1.31
RSPO1Q2MKA7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RSPO1Q2MKA7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
RSPO1Q2MKA7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.21■■□□□ 1.31
RSPO1Q2MKA7 AL391121.1-201ENST00000607967 1349 ntBASIC23.21■■□□□ 1.31
RSPO1Q2MKA7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
RSPO1Q2MKA7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
RSPO1Q2MKA7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RSPO1Q2MKA7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
RSPO1Q2MKA7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RSPO1Q2MKA7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RSPO1Q2MKA7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RSPO1Q2MKA7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RSPO1Q2MKA7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RSPO1Q2MKA7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
RSPO1Q2MKA7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RSPO1Q2MKA7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RSPO1Q2MKA7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RSPO1Q2MKA7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
RSPO1Q2MKA7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RSPO1Q2MKA7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RSPO1Q2MKA7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
RSPO1Q2MKA7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RSPO1Q2MKA7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.15■■□□□ 1.3
RSPO1Q2MKA7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RSPO1Q2MKA7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.14■■□□□ 1.3
RSPO1Q2MKA7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RSPO1Q2MKA7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC23.14■■□□□ 1.29
RSPO1Q2MKA7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RSPO1Q2MKA7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RSPO1Q2MKA7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
RSPO1Q2MKA7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RSPO1Q2MKA7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RSPO1Q2MKA7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
RSPO1Q2MKA7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
RSPO1Q2MKA7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RSPO1Q2MKA7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC23.12■■□□□ 1.29
RSPO1Q2MKA7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RSPO1Q2MKA7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RSPO1Q2MKA7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RSPO1Q2MKA7 ABCB10P3-201ENST00000561950 2166 ntBASIC23.11■■□□□ 1.29
RSPO1Q2MKA7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RSPO1Q2MKA7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RSPO1Q2MKA7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
RSPO1Q2MKA7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RSPO1Q2MKA7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RSPO1Q2MKA7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RSPO1Q2MKA7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RSPO1Q2MKA7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RSPO1Q2MKA7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RSPO1Q2MKA7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
RSPO1Q2MKA7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC23.08■■□□□ 1.29
RSPO1Q2MKA7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RSPO1Q2MKA7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
RSPO1Q2MKA7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RSPO1Q2MKA7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
RSPO1Q2MKA7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RSPO1Q2MKA7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RSPO1Q2MKA7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
RSPO1Q2MKA7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
RSPO1Q2MKA7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RSPO1Q2MKA7 AC139426.1-201ENST00000568218 2529 ntBASIC23.04■■□□□ 1.28
RSPO1Q2MKA7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23.02■■□□□ 1.28
RSPO1Q2MKA7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RSPO1Q2MKA7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RSPO1Q2MKA7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RSPO1Q2MKA7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RSPO1Q2MKA7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RSPO1Q2MKA7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RSPO1Q2MKA7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23■■□□□ 1.27
RSPO1Q2MKA7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23■■□□□ 1.27
RSPO1Q2MKA7 SUZ12P1-203ENST00000578195 985 ntBASIC23■■□□□ 1.27
RSPO1Q2MKA7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
RSPO1Q2MKA7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RSPO1Q2MKA7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC22.99■■□□□ 1.27
RSPO1Q2MKA7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC22.99■■□□□ 1.27
RSPO1Q2MKA7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
RSPO1Q2MKA7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RSPO1Q2MKA7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC22.98■■□□□ 1.27
RSPO1Q2MKA7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC22.98■■□□□ 1.27
RSPO1Q2MKA7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RSPO1Q2MKA7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
RSPO1Q2MKA7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
RSPO1Q2MKA7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
RSPO1Q2MKA7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RSPO1Q2MKA7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RSPO1Q2MKA7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC22.97■■□□□ 1.27
RSPO1Q2MKA7 AC010864.1-201ENST00000609407 1511 ntBASIC22.97■■□□□ 1.27
RSPO1Q2MKA7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms