Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC34.98■■■■□ 3.19
KCNQ4P56696 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC34.97■■■■□ 3.19
KCNQ4P56696 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC34.97■■■■□ 3.19
KCNQ4P56696 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC34.97■■■■□ 3.19
KCNQ4P56696 ABHD17AP3-201ENST00000503096 1137 ntBASIC34.97■■■■□ 3.19
KCNQ4P56696 AC108673.1-201ENST00000510422 1159 ntBASIC34.96■■■■□ 3.19
KCNQ4P56696 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
KCNQ4P56696 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC34.94■■■■□ 3.18
KCNQ4P56696 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
KCNQ4P56696 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC34.93■■■■□ 3.18
KCNQ4P56696 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC34.93■■■■□ 3.18
KCNQ4P56696 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC34.93■■■■□ 3.18
KCNQ4P56696 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC34.93■■■■□ 3.18
KCNQ4P56696 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC34.91■■■■□ 3.18
KCNQ4P56696 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC34.9■■■■□ 3.18
KCNQ4P56696 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC34.9■■■■□ 3.18
KCNQ4P56696 LINC01971-201ENST00000617888 1048 ntBASIC34.9■■■■□ 3.18
KCNQ4P56696 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC34.9■■■■□ 3.18
KCNQ4P56696 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
KCNQ4P56696 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
KCNQ4P56696 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
KCNQ4P56696 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC34.89■■■■□ 3.18
KCNQ4P56696 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC34.86■■■■□ 3.17
KCNQ4P56696 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
KCNQ4P56696 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
KCNQ4P56696 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC34.84■■■■□ 3.17
KCNQ4P56696 AGPS-202ENST00000409888 815 ntTSL 4 BASIC34.83■■■■□ 3.17
KCNQ4P56696 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
KCNQ4P56696 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
KCNQ4P56696 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC34.81■■■■□ 3.16
KCNQ4P56696 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
KCNQ4P56696 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC34.8■■■■□ 3.16
KCNQ4P56696 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC34.8■■■■□ 3.16
KCNQ4P56696 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC34.8■■■■□ 3.16
KCNQ4P56696 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
KCNQ4P56696 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
KCNQ4P56696 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC34.79■■■■□ 3.16
KCNQ4P56696 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
KCNQ4P56696 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
KCNQ4P56696 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC34.78■■■■□ 3.16
KCNQ4P56696 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
KCNQ4P56696 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
KCNQ4P56696 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
KCNQ4P56696 METRNL-202ENST00000570778 967 ntTSL 5 BASIC34.75■■■■□ 3.15
KCNQ4P56696 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
KCNQ4P56696 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
KCNQ4P56696 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC34.73■■■■□ 3.15
KCNQ4P56696 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
KCNQ4P56696 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
KCNQ4P56696 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
KCNQ4P56696 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC34.71■■■■□ 3.15
KCNQ4P56696 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC34.71■■■■□ 3.15
KCNQ4P56696 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
KCNQ4P56696 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC34.7■■■■□ 3.14
KCNQ4P56696 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
KCNQ4P56696 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC34.69■■■■□ 3.14
KCNQ4P56696 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
KCNQ4P56696 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
KCNQ4P56696 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
KCNQ4P56696 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
KCNQ4P56696 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
KCNQ4P56696 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC34.62■■■■□ 3.13
KCNQ4P56696 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC34.62■■■■□ 3.13
KCNQ4P56696 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC34.61■■■■□ 3.13
KCNQ4P56696 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
KCNQ4P56696 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
KCNQ4P56696 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
KCNQ4P56696 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC34.59■■■■□ 3.13
KCNQ4P56696 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC34.59■■■■□ 3.13
KCNQ4P56696 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC34.58■■■■□ 3.13
KCNQ4P56696 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC34.58■■■■□ 3.13
KCNQ4P56696 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC34.57■■■■□ 3.13
KCNQ4P56696 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC34.57■■■■□ 3.12
KCNQ4P56696 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC34.57■■■■□ 3.12
KCNQ4P56696 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
KCNQ4P56696 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC34.55■■■■□ 3.12
KCNQ4P56696 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC34.55■■■■□ 3.12
KCNQ4P56696 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC34.54■■■■□ 3.12
KCNQ4P56696 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
KCNQ4P56696 DUX4L13-201ENST00000554103 1267 ntBASIC34.53■■■■□ 3.12
KCNQ4P56696 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC34.53■■■■□ 3.12
KCNQ4P56696 DUX4L15-201ENST00000611059 1267 ntBASIC34.53■■■■□ 3.12
KCNQ4P56696 DUX4L23-201ENST00000615195 1269 ntBASIC34.53■■■■□ 3.12
KCNQ4P56696 DUX4L24-201ENST00000617576 1269 ntBASIC34.53■■■■□ 3.12
KCNQ4P56696 DUX4L22-201ENST00000618238 1269 ntBASIC34.53■■■■□ 3.12
KCNQ4P56696 DUX4L20-201ENST00000619712 1269 ntBASIC34.53■■■■□ 3.12
KCNQ4P56696 DUX4L21-201ENST00000622058 1269 ntBASIC34.53■■■■□ 3.12
KCNQ4P56696 DUX4L10-201ENST00000622460 1267 ntBASIC34.53■■■■□ 3.12
KCNQ4P56696 DUX4L25-201ENST00000624915 1269 ntBASIC34.53■■■■□ 3.12
KCNQ4P56696 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC34.53■■■■□ 3.12
KCNQ4P56696 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC34.52■■■■□ 3.12
KCNQ4P56696 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC34.52■■■■□ 3.12
KCNQ4P56696 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
KCNQ4P56696 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC34.51■■■■□ 3.12
KCNQ4P56696 HES6-205ENST00000409356 528 ntTSL 2 BASIC34.51■■■■□ 3.12
KCNQ4P56696 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC34.51■■■■□ 3.12
KCNQ4P56696 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC34.49■■■■□ 3.11
KCNQ4P56696 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
KCNQ4P56696 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
KCNQ4P56696 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC34.47■■■■□ 3.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms