Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
CPT1AP50416 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CPT1AP50416 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CPT1AP50416 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CPT1AP50416 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CPT1AP50416 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.14■■■□□ 2.41
CPT1AP50416 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CPT1AP50416 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.12■■■□□ 2.41
CPT1AP50416 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.11■■■□□ 2.41
CPT1AP50416 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.11■■■□□ 2.41
CPT1AP50416 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CPT1AP50416 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.11■■■□□ 2.41
CPT1AP50416 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CPT1AP50416 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CPT1AP50416 MIR6090-201ENST00000622481 60 ntBASIC30.1■■■□□ 2.41
CPT1AP50416 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CPT1AP50416 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CPT1AP50416 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.09■■■□□ 2.41
CPT1AP50416 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.09■■■□□ 2.41
CPT1AP50416 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.08■■■□□ 2.41
CPT1AP50416 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CPT1AP50416 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.4
CPT1AP50416 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CPT1AP50416 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CPT1AP50416 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CPT1AP50416 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CPT1AP50416 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CPT1AP50416 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.05■■■□□ 2.4
CPT1AP50416 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CPT1AP50416 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
CPT1AP50416 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CPT1AP50416 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.03■■■□□ 2.4
CPT1AP50416 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.03■■■□□ 2.4
CPT1AP50416 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
CPT1AP50416 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CPT1AP50416 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CPT1AP50416 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30■■■□□ 2.39
CPT1AP50416 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CPT1AP50416 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CPT1AP50416 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CPT1AP50416 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
CPT1AP50416 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.95■■■□□ 2.39
CPT1AP50416 MIR639-201ENST00000384974 98 ntBASIC29.95■■■□□ 2.39
CPT1AP50416 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.95■■■□□ 2.39
CPT1AP50416 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.95■■■□□ 2.39
CPT1AP50416 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.94■■■□□ 2.38
CPT1AP50416 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CPT1AP50416 MIR4449-201ENST00000578365 66 ntBASIC29.94■■■□□ 2.38
CPT1AP50416 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
CPT1AP50416 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC29.91■■■□□ 2.38
CPT1AP50416 LINC01971-201ENST00000617888 1048 ntBASIC29.91■■■□□ 2.38
CPT1AP50416 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC29.9■■■□□ 2.38
CPT1AP50416 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
CPT1AP50416 MIR3648-2-201ENST00000581792 180 ntBASIC29.89■■■□□ 2.38
CPT1AP50416 MIR3648-1-201ENST00000615959 180 ntBASIC29.89■■■□□ 2.38
CPT1AP50416 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
CPT1AP50416 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CPT1AP50416 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.88■■■□□ 2.37
CPT1AP50416 AC120057.4-201ENST00000624722 1615 ntBASIC29.87■■■□□ 2.37
CPT1AP50416 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.87■■■□□ 2.37
CPT1AP50416 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.87■■■□□ 2.37
CPT1AP50416 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CPT1AP50416 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CPT1AP50416 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC29.86■■■□□ 2.37
CPT1AP50416 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.86■■■□□ 2.37
CPT1AP50416 AC016575.1-201ENST00000607026 382 ntBASIC29.86■■■□□ 2.37
CPT1AP50416 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.86■■■□□ 2.37
CPT1AP50416 DUX4L11-201ENST00000611504 1267 ntBASIC29.86■■■□□ 2.37
CPT1AP50416 DUX4L12-201ENST00000614593 1267 ntBASIC29.86■■■□□ 2.37
CPT1AP50416 DUX4L14-201ENST00000621227 1267 ntBASIC29.86■■■□□ 2.37
CPT1AP50416 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
CPT1AP50416 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.85■■■□□ 2.37
CPT1AP50416 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.85■■■□□ 2.37
CPT1AP50416 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.85■■■□□ 2.37
CPT1AP50416 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CPT1AP50416 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC29.81■■■□□ 2.36
CPT1AP50416 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.81■■■□□ 2.36
CPT1AP50416 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC29.81■■■□□ 2.36
CPT1AP50416 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
CPT1AP50416 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CPT1AP50416 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.79■■■□□ 2.36
CPT1AP50416 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CPT1AP50416 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.78■■■□□ 2.36
CPT1AP50416 CR559946.2-201ENST00000623684 991 ntBASIC29.78■■■□□ 2.36
CPT1AP50416 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
CPT1AP50416 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.77■■■□□ 2.36
CPT1AP50416 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CPT1AP50416 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
CPT1AP50416 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.76■■■□□ 2.35
CPT1AP50416 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC29.74■■■□□ 2.35
CPT1AP50416 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC29.74■■■□□ 2.35
CPT1AP50416 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CPT1AP50416 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
CPT1AP50416 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CPT1AP50416 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
CPT1AP50416 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CPT1AP50416 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CPT1AP50416 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.35
CPT1AP50416 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC29.7■■■□□ 2.34
CPT1AP50416 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms