Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.93■□□□□ 0.94
Hist1h1dP43277 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hist1h1dP43277 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hist1h1dP43277 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hist1h1dP43277 Peli2-204ENSMUST00000226513 1320 ntBASIC20.92■□□□□ 0.94
Hist1h1dP43277 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hist1h1dP43277 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hist1h1dP43277 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hist1h1dP43277 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hist1h1dP43277 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Hist1h1dP43277 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Hist1h1dP43277 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hist1h1dP43277 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.86■□□□□ 0.93
Hist1h1dP43277 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hist1h1dP43277 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.86■□□□□ 0.93
Hist1h1dP43277 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.85■□□□□ 0.93
Hist1h1dP43277 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.85■□□□□ 0.93
Hist1h1dP43277 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hist1h1dP43277 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.83■□□□□ 0.93
Hist1h1dP43277 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Hist1h1dP43277 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hist1h1dP43277 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hist1h1dP43277 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Hist1h1dP43277 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Hist1h1dP43277 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Hist1h1dP43277 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hist1h1dP43277 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Hist1h1dP43277 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hist1h1dP43277 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Hist1h1dP43277 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hist1h1dP43277 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Hist1h1dP43277 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hist1h1dP43277 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hist1h1dP43277 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hist1h1dP43277 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hist1h1dP43277 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hist1h1dP43277 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hist1h1dP43277 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hist1h1dP43277 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hist1h1dP43277 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hist1h1dP43277 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hist1h1dP43277 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hist1h1dP43277 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hist1h1dP43277 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hist1h1dP43277 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
Hist1h1dP43277 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Hist1h1dP43277 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hist1h1dP43277 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hist1h1dP43277 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hist1h1dP43277 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hist1h1dP43277 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hist1h1dP43277 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hist1h1dP43277 Gm26115-201ENSMUST00000175605 87 ntBASIC20.7■□□□□ 0.9
Hist1h1dP43277 Gm8109-201ENSMUST00000194076 746 ntBASIC20.7■□□□□ 0.9
Hist1h1dP43277 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hist1h1dP43277 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hist1h1dP43277 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hist1h1dP43277 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hist1h1dP43277 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hist1h1dP43277 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hist1h1dP43277 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hist1h1dP43277 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hist1h1dP43277 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hist1h1dP43277 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hist1h1dP43277 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hist1h1dP43277 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.65■□□□□ 0.9
Hist1h1dP43277 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hist1h1dP43277 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hist1h1dP43277 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hist1h1dP43277 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hist1h1dP43277 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hist1h1dP43277 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hist1h1dP43277 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hist1h1dP43277 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hist1h1dP43277 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Hist1h1dP43277 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Hist1h1dP43277 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hist1h1dP43277 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Hist1h1dP43277 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hist1h1dP43277 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hist1h1dP43277 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Hist1h1dP43277 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hist1h1dP43277 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hist1h1dP43277 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hist1h1dP43277 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hist1h1dP43277 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.58■□□□□ 0.89
Hist1h1dP43277 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hist1h1dP43277 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Hist1h1dP43277 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hist1h1dP43277 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hist1h1dP43277 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hist1h1dP43277 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hist1h1dP43277 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.55■□□□□ 0.88
Hist1h1dP43277 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Hist1h1dP43277 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Hist1h1dP43277 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Hist1h1dP43277 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hist1h1dP43277 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hist1h1dP43277 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Hist1h1dP43277 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms