Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.12■□□□□ 0.81
Cd27P41272 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cd27P41272 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.11■□□□□ 0.81
Cd27P41272 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cd27P41272 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.1■□□□□ 0.81
Cd27P41272 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cd27P41272 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.1■□□□□ 0.81
Cd27P41272 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cd27P41272 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cd27P41272 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cd27P41272 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.08■□□□□ 0.81
Cd27P41272 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cd27P41272 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cd27P41272 Gm9397-201ENSMUST00000200125 605 ntBASIC20.07■□□□□ 0.8
Cd27P41272 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cd27P41272 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.05■□□□□ 0.8
Cd27P41272 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.05■□□□□ 0.8
Cd27P41272 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cd27P41272 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cd27P41272 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cd27P41272 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.04■□□□□ 0.8
Cd27P41272 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cd27P41272 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd27P41272 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd27P41272 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Cd27P41272 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.02■□□□□ 0.79
Cd27P41272 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.02■□□□□ 0.79
Cd27P41272 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cd27P41272 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.01■□□□□ 0.79
Cd27P41272 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cd27P41272 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cd27P41272 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Cd27P41272 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cd27P41272 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cd27P41272 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cd27P41272 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cd27P41272 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.98■□□□□ 0.79
Cd27P41272 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cd27P41272 Gm45855-201ENSMUST00000212546 880 ntBASIC19.97■□□□□ 0.79
Cd27P41272 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cd27P41272 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.96■□□□□ 0.79
Cd27P41272 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cd27P41272 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.95■□□□□ 0.78
Cd27P41272 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cd27P41272 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cd27P41272 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cd27P41272 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cd27P41272 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cd27P41272 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Cd27P41272 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Cd27P41272 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cd27P41272 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cd27P41272 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.92■□□□□ 0.78
Cd27P41272 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.92■□□□□ 0.78
Cd27P41272 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.92■□□□□ 0.78
Cd27P41272 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cd27P41272 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cd27P41272 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cd27P41272 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cd27P41272 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cd27P41272 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.91■□□□□ 0.78
Cd27P41272 Gm24970-201ENSMUST00000175582 82 ntBASIC19.9■□□□□ 0.78
Cd27P41272 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cd27P41272 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.9■□□□□ 0.78
Cd27P41272 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cd27P41272 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Cd27P41272 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Cd27P41272 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.87■□□□□ 0.77
Cd27P41272 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.87■□□□□ 0.77
Cd27P41272 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cd27P41272 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cd27P41272 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cd27P41272 Amer2-203ENSMUST00000225247 2662 ntBASIC19.86■□□□□ 0.77
Cd27P41272 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cd27P41272 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cd27P41272 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.85■□□□□ 0.77
Cd27P41272 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Cd27P41272 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.84■□□□□ 0.77
Cd27P41272 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cd27P41272 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cd27P41272 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cd27P41272 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Cd27P41272 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cd27P41272 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
Cd27P41272 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cd27P41272 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.81■□□□□ 0.76
Cd27P41272 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cd27P41272 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cd27P41272 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cd27P41272 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cd27P41272 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cd27P41272 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cd27P41272 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cd27P41272 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cd27P41272 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cd27P41272 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cd27P41272 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cd27P41272 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cd27P41272 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cd27P41272 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms