Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdkn1aP39689 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Cdkn1aP39689 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdkn1aP39689 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cdkn1aP39689 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cdkn1aP39689 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdkn1aP39689 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkn1aP39689 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkn1aP39689 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkn1aP39689 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkn1aP39689 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkn1aP39689 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkn1aP39689 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.61■□□□□ 0.89
Cdkn1aP39689 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkn1aP39689 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkn1aP39689 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkn1aP39689 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkn1aP39689 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkn1aP39689 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkn1aP39689 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkn1aP39689 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cdkn1aP39689 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdkn1aP39689 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdkn1aP39689 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkn1aP39689 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkn1aP39689 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkn1aP39689 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkn1aP39689 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkn1aP39689 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkn1aP39689 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkn1aP39689 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdkn1aP39689 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Cdkn1aP39689 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdkn1aP39689 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdkn1aP39689 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cdkn1aP39689 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.51■□□□□ 0.87
Cdkn1aP39689 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.5■□□□□ 0.87
Cdkn1aP39689 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdkn1aP39689 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cdkn1aP39689 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.49■□□□□ 0.87
Cdkn1aP39689 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.49■□□□□ 0.87
Cdkn1aP39689 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cdkn1aP39689 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Cdkn1aP39689 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cdkn1aP39689 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdkn1aP39689 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.48■□□□□ 0.87
Cdkn1aP39689 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdkn1aP39689 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdkn1aP39689 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdkn1aP39689 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdkn1aP39689 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdkn1aP39689 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdkn1aP39689 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cdkn1aP39689 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Cdkn1aP39689 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdkn1aP39689 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdkn1aP39689 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdkn1aP39689 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdkn1aP39689 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cdkn1aP39689 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdkn1aP39689 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.4■□□□□ 0.86
Cdkn1aP39689 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cdkn1aP39689 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cdkn1aP39689 Gm6821-201ENSMUST00000107540 542 ntBASIC20.39■□□□□ 0.85
Cdkn1aP39689 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdkn1aP39689 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.38■□□□□ 0.85
Cdkn1aP39689 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cdkn1aP39689 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Cdkn1aP39689 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdkn1aP39689 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cdkn1aP39689 Gm8503-201ENSMUST00000118131 455 ntBASIC20.33■□□□□ 0.85
Cdkn1aP39689 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cdkn1aP39689 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.33■□□□□ 0.85
Cdkn1aP39689 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdkn1aP39689 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdkn1aP39689 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdkn1aP39689 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdkn1aP39689 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cdkn1aP39689 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cdkn1aP39689 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdkn1aP39689 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdkn1aP39689 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdkn1aP39689 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.3■□□□□ 0.84
Cdkn1aP39689 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.3■□□□□ 0.84
Cdkn1aP39689 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdkn1aP39689 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.3■□□□□ 0.84
Cdkn1aP39689 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdkn1aP39689 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdkn1aP39689 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Cdkn1aP39689 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cdkn1aP39689 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.28■□□□□ 0.84
Cdkn1aP39689 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.27■□□□□ 0.84
Cdkn1aP39689 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdkn1aP39689 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdkn1aP39689 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdkn1aP39689 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdkn1aP39689 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Cdkn1aP39689 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdkn1aP39689 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
Cdkn1aP39689 Nkain2-201ENSMUST00000092602 558 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms