Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
COL15A1P39059 MACF1-219ENST00000484793 834 ntTSL 2 BASIC34.44■■■■□ 3.1
COL15A1P39059 CIB2-204ENST00000557846 934 ntTSL 3 BASIC34.44■■■■□ 3.1
COL15A1P39059 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
COL15A1P39059 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
COL15A1P39059 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
COL15A1P39059 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC34.42■■■■□ 3.1
COL15A1P39059 MIR6090-201ENST00000622481 60 ntBASIC34.41■■■■□ 3.1
COL15A1P39059 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC34.41■■■■□ 3.1
COL15A1P39059 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC34.4■■■■□ 3.1
COL15A1P39059 MIR4449-201ENST00000578365 66 ntBASIC34.4■■■■□ 3.1
COL15A1P39059 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC34.4■■■■□ 3.1
COL15A1P39059 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC34.39■■■■□ 3.1
COL15A1P39059 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
COL15A1P39059 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
COL15A1P39059 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC34.39■■■■□ 3.1
COL15A1P39059 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
COL15A1P39059 AC108673.1-201ENST00000510422 1159 ntBASIC34.37■■■■□ 3.09
COL15A1P39059 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC34.36■■■■□ 3.09
COL15A1P39059 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC34.36■■■■□ 3.09
COL15A1P39059 MIR639-201ENST00000384974 98 ntBASIC34.35■■■■□ 3.09
COL15A1P39059 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC34.35■■■■□ 3.09
COL15A1P39059 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
COL15A1P39059 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
COL15A1P39059 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
COL15A1P39059 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC34.32■■■■□ 3.08
COL15A1P39059 RNF166-209ENST00000567844 633 ntTSL 5 BASIC34.32■■■■□ 3.08
COL15A1P39059 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC34.31■■■■□ 3.08
COL15A1P39059 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC34.31■■■■□ 3.08
COL15A1P39059 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC34.3■■■■□ 3.08
COL15A1P39059 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC34.3■■■■□ 3.08
COL15A1P39059 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC34.29■■■■□ 3.08
COL15A1P39059 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC34.29■■■■□ 3.08
COL15A1P39059 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC34.29■■■■□ 3.08
COL15A1P39059 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
COL15A1P39059 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
COL15A1P39059 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
COL15A1P39059 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC34.26■■■■□ 3.08
COL15A1P39059 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC34.26■■■■□ 3.07
COL15A1P39059 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC34.26■■■■□ 3.07
COL15A1P39059 MIR3648-2-201ENST00000581792 180 ntBASIC34.25■■■■□ 3.07
COL15A1P39059 MIR3648-1-201ENST00000615959 180 ntBASIC34.25■■■■□ 3.07
COL15A1P39059 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
COL15A1P39059 AC016575.1-201ENST00000607026 382 ntBASIC34.24■■■■□ 3.07
COL15A1P39059 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
COL15A1P39059 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
COL15A1P39059 GDI1-215ENST00000630693 786 ntTSL 4 BASIC34.23■■■■□ 3.07
COL15A1P39059 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC34.23■■■■□ 3.07
COL15A1P39059 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
COL15A1P39059 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
COL15A1P39059 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC34.21■■■■□ 3.07
COL15A1P39059 CR559946.2-201ENST00000623684 991 ntBASIC34.2■■■■□ 3.07
COL15A1P39059 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
COL15A1P39059 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC34.19■■■■□ 3.06
COL15A1P39059 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC34.19■■■■□ 3.06
COL15A1P39059 LINC01971-201ENST00000617888 1048 ntBASIC34.19■■■■□ 3.06
COL15A1P39059 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC34.18■■■■□ 3.06
COL15A1P39059 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC34.18■■■■□ 3.06
COL15A1P39059 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
COL15A1P39059 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
COL15A1P39059 DUX4L11-201ENST00000611504 1267 ntBASIC34.17■■■■□ 3.06
COL15A1P39059 DUX4L12-201ENST00000614593 1267 ntBASIC34.17■■■■□ 3.06
COL15A1P39059 DUX4L14-201ENST00000621227 1267 ntBASIC34.17■■■■□ 3.06
COL15A1P39059 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC34.17■■■■□ 3.06
COL15A1P39059 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
COL15A1P39059 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC34.15■■■■□ 3.06
COL15A1P39059 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC34.15■■■■□ 3.06
COL15A1P39059 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
COL15A1P39059 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC34.14■■■■□ 3.06
COL15A1P39059 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC34.14■■■■□ 3.06
COL15A1P39059 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
COL15A1P39059 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
COL15A1P39059 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC34.13■■■■□ 3.05
COL15A1P39059 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC34.12■■■■□ 3.05
COL15A1P39059 AGPS-202ENST00000409888 815 ntTSL 4 BASIC34.11■■■■□ 3.05
COL15A1P39059 CALM3-209ENST00000597743 577 ntTSL 4 BASIC34.1■■■■□ 3.05
COL15A1P39059 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC34.09■■■■□ 3.05
COL15A1P39059 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
COL15A1P39059 AC120057.4-201ENST00000624722 1615 ntBASIC34.06■■■■□ 3.04
COL15A1P39059 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
COL15A1P39059 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
COL15A1P39059 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC34.05■■■■□ 3.04
COL15A1P39059 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
COL15A1P39059 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC34.04■■■■□ 3.04
COL15A1P39059 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC34.04■■■■□ 3.04
COL15A1P39059 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC34.04■■■■□ 3.04
COL15A1P39059 HSD17B1P1-201ENST00000590052 955 ntBASIC34.03■■■■□ 3.04
COL15A1P39059 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
COL15A1P39059 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC34.01■■■■□ 3.04
COL15A1P39059 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC34■■■■□ 3.03
COL15A1P39059 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
COL15A1P39059 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
COL15A1P39059 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC33.99■■■■□ 3.03
COL15A1P39059 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC33.99■■■■□ 3.03
COL15A1P39059 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC33.99■■■■□ 3.03
COL15A1P39059 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC33.98■■■■□ 3.03
COL15A1P39059 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC33.98■■■■□ 3.03
COL15A1P39059 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
COL15A1P39059 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
COL15A1P39059 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC33.97■■■■□ 3.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms