Protein–RNA interactions for Protein: P38789

SSF1, Ribosome biogenesis protein SSF1, yeastyeast

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSF1P38789 TRT2tT(CGU)K 72 nt11.16□□□□□ -0.62
SSF1P38789 SAM2YDR502C 1155 nt11.15□□□□□ -0.62
SSF1P38789 RAD51YER095W 1203 nt11.15□□□□□ -0.62
SSF1P38789 YJL055WYJL055W 738 nt11.14□□□□□ -0.63
SSF1P38789 HXT12YIL170W 1374 nt11.14□□□□□ -0.63
SSF1P38789 YLR349WYLR349W 507 nt11.13□□□□□ -0.63
SSF1P38789 YEL008WYEL008W 381 nt11.12□□□□□ -0.63
SSF1P38789 PAU21YOR394W 495 nt11.12□□□□□ -0.63
SSF1P38789 PAU22YPL282C 495 nt11.12□□□□□ -0.63
SSF1P38789 LSB5YCL034W 1065 nt11.12□□□□□ -0.63
SSF1P38789 UFO1YML088W 2007 nt11.12□□□□□ -0.63
SSF1P38789 CSM1YCR086W 573 nt11.11□□□□□ -0.63
SSF1P38789 URA6YKL024C 615 nt11.11□□□□□ -0.63
SSF1P38789 NAR1YNL240C 1476 nt11.11□□□□□ -0.63
SSF1P38789 NUC1YJL208C 990 nt11.1□□□□□ -0.63
SSF1P38789 OYE3YPL171C 1203 nt11.1□□□□□ -0.63
SSF1P38789 PBP1YGR178C 2169 nt11.1□□□□□ -0.63
SSF1P38789 ADH7YCR105W 1086 nt11.09□□□□□ -0.63
SSF1P38789 GPN2YOR262W 1044 nt11.08□□□□□ -0.64
SSF1P38789 RSC4YKR008W 1878 nt11.08□□□□□ -0.64
SSF1P38789 BNI5YNL166C 1347 nt11.08□□□□□ -0.64
SSF1P38789 CYT2YKL087C 675 nt11.07□□□□□ -0.64
SSF1P38789 PAU15YIR041W 375 nt11.06□□□□□ -0.64
SSF1P38789 PET8YNL003C 855 nt11.06□□□□□ -0.64
SSF1P38789 SEC61YLR378C 1443 nt11.05□□□□□ -0.64
SSF1P38789 PHO23YNL097C 993 nt11.03□□□□□ -0.64
SSF1P38789 MCM5YLR274W 2328 nt11.02□□□□□ -0.64
SSF1P38789 RPT5YOR117W 1305 nt11.02□□□□□ -0.65
SSF1P38789 CPD1YGR247W 720 nt11.01□□□□□ -0.65
SSF1P38789 YJL067WYJL067W 351 nt11.01□□□□□ -0.65
SSF1P38789 YJL118WYJL118W 660 nt11.01□□□□□ -0.65
SSF1P38789 MSC1YML128C 1542 nt11□□□□□ -0.65
SSF1P38789 OXA1YER154W 1209 nt10.99□□□□□ -0.65
SSF1P38789 ARO7YPR060C 771 nt10.99□□□□□ -0.65
SSF1P38789 YER188WYER188W 720 nt10.97□□□□□ -0.65
SSF1P38789 RIB7YBR153W 735 nt10.97□□□□□ -0.65
SSF1P38789 MAS1YLR163C 1389 nt10.97□□□□□ -0.65
SSF1P38789 RAS2YNL098C 969 nt10.96□□□□□ -0.65
SSF1P38789 GAL3YDR009W 1563 nt10.94□□□□□ -0.66
SSF1P38789 SAM3YPL274W 1764 nt10.94□□□□□ -0.66
SSF1P38789 CWC15YDR163W 528 nt10.93□□□□□ -0.66
SSF1P38789 YEL009C-AYEL009C-A 408 nt10.93□□□□□ -0.66
SSF1P38789 DLD2YDL178W 1593 nt10.93□□□□□ -0.66
SSF1P38789 FUB1YCR076C 753 nt10.92□□□□□ -0.66
SSF1P38789 GID7YCL039W 2238 nt10.92□□□□□ -0.66
SSF1P38789 RSC8YFR037C 1674 nt10.92□□□□□ -0.66
SSF1P38789 CCT5YJR064W 1689 nt10.91□□□□□ -0.66
SSF1P38789 FLR1YBR008C 1647 nt10.91□□□□□ -0.66
SSF1P38789 OYE2YHR179W 1203 nt10.9□□□□□ -0.66
SSF1P38789 ESBP6YNL125C 2022 nt10.89□□□□□ -0.67
SSF1P38789 TPS1YBR126C 1488 nt10.89□□□□□ -0.67
SSF1P38789 tS(GCU)LtS(GCU)L 80 nt10.88□□□□□ -0.67
SSF1P38789 SPP2YOR148C 558 nt10.88□□□□□ -0.67
SSF1P38789 MCH5YOR306C 1566 nt10.88□□□□□ -0.67
SSF1P38789 FMS1YMR020W 1527 nt10.87□□□□□ -0.67
SSF1P38789 OSH7YHR001W 1314 nt10.86□□□□□ -0.67
SSF1P38789 YPS3YLR121C 1527 nt10.86□□□□□ -0.67
SSF1P38789 THI72YOR192C 1800 nt10.85□□□□□ -0.67
SSF1P38789 INA1YLR413W 2028 nt10.84□□□□□ -0.67
SSF1P38789 EAF3YPR023C 1206 nt10.84□□□□□ -0.67
SSF1P38789 YAT1YAR035W 2064 nt10.84□□□□□ -0.67
SSF1P38789 TAF13YML098W 504 nt10.82□□□□□ -0.68
SSF1P38789 YPL041CYPL041C 624 nt10.82□□□□□ -0.68
SSF1P38789 ESS1YJR017C 513 nt10.81□□□□□ -0.68
SSF1P38789 SOL2YCR073W-A 948 nt10.79□□□□□ -0.68
SSF1P38789 LSM5YER146W 282 nt10.79□□□□□ -0.68
SSF1P38789 SNZ1YMR096W 894 nt10.79□□□□□ -0.68
SSF1P38789 VPS62YGR141W 1404 nt10.78□□□□□ -0.68
SSF1P38789 HEM13YDR044W 987 nt10.76□□□□□ -0.69
SSF1P38789 PAU5YFL020C 369 nt10.76□□□□□ -0.69
SSF1P38789 NAS6YGR232W 687 nt10.76□□□□□ -0.69
SSF1P38789 DDI1YER143W 1287 nt10.75□□□□□ -0.69
SSF1P38789 HEM14YER014W 1620 nt10.75□□□□□ -0.69
SSF1P38789 COG1YGL223C 1254 nt10.74□□□□□ -0.69
SSF1P38789 TMA23YMR269W 636 nt10.74□□□□□ -0.69
SSF1P38789 ACH1YBL015W 1581 nt10.73□□□□□ -0.69
SSF1P38789 URH1YDR400W 1023 nt10.72□□□□□ -0.69
SSF1P38789 YIL100C-AYIL100C-A 339 nt10.72□□□□□ -0.69
SSF1P38789 YPR126CYPR126C 309 nt10.72□□□□□ -0.69
SSF1P38789 DAK2YFL053W 1776 nt10.72□□□□□ -0.69
SSF1P38789 RPC82YPR190C 1965 nt10.72□□□□□ -0.69
SSF1P38789 YNL024CYNL024C 741 nt10.71□□□□□ -0.69
SSF1P38789 IML3YBR107C 738 nt10.7□□□□□ -0.7
SSF1P38789 RDN25-1RDN25-1 3396 nt10.69□□□□□ -0.7
SSF1P38789 RDN25-2RDN25-2 3396 nt10.69□□□□□ -0.7
SSF1P38789 CTI6YPL181W 1521 nt10.69□□□□□ -0.7
SSF1P38789 YDL086WYDL086W 822 nt10.69□□□□□ -0.7
SSF1P38789 MHF1YOL086W-A 273 nt10.69□□□□□ -0.7
SSF1P38789 TAT2YOL020W 1779 nt10.68□□□□□ -0.7
SSF1P38789 YMR262WYMR262W 942 nt10.68□□□□□ -0.7
SSF1P38789 PGC1YPL206C 966 nt10.68□□□□□ -0.7
SSF1P38789 YDR306CYDR306C 1437 nt10.67□□□□□ -0.7
SSF1P38789 POT1YIL160C 1254 nt10.67□□□□□ -0.7
SSF1P38789 ASP3-1YLR155C 1089 nt10.67□□□□□ -0.7
SSF1P38789 ASP3-2YLR157C 1089 nt10.67□□□□□ -0.7
SSF1P38789 ASP3-3YLR158C 1089 nt10.67□□□□□ -0.7
SSF1P38789 ASP3-4YLR160C 1089 nt10.67□□□□□ -0.7
SSF1P38789 RFC1YOR217W 2586 nt10.66□□□□□ -0.7
SSF1P38789 IMO32YGR031W 1029 nt10.66□□□□□ -0.7
SSF1P38789 STP3YLR375W 1032 nt10.66□□□□□ -0.7
Retrieved 100 of 7,029 protein–RNA pairs in 13 ms