Protein–RNA interactions for Protein: P35250

RFC2, Replication factor C subunit 2, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2P35250 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.58■■■□□ 2.33
RFC2P35250 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.58■■■□□ 2.33
RFC2P35250 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.58■■■□□ 2.33
RFC2P35250 AC016575.1-201ENST00000607026 382 ntBASIC29.58■■■□□ 2.33
RFC2P35250 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
RFC2P35250 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC29.57■■■□□ 2.32
RFC2P35250 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.57■■■□□ 2.32
RFC2P35250 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
RFC2P35250 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.56■■■□□ 2.32
RFC2P35250 LINC01971-201ENST00000617888 1048 ntBASIC29.56■■■□□ 2.32
RFC2P35250 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
RFC2P35250 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
RFC2P35250 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.55■■■□□ 2.32
RFC2P35250 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
RFC2P35250 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC29.54■■■□□ 2.32
RFC2P35250 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
RFC2P35250 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
RFC2P35250 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.52■■■□□ 2.32
RFC2P35250 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.52■■■□□ 2.32
RFC2P35250 DUX4L11-201ENST00000611504 1267 ntBASIC29.52■■■□□ 2.32
RFC2P35250 DUX4L12-201ENST00000614593 1267 ntBASIC29.52■■■□□ 2.32
RFC2P35250 DUX4L14-201ENST00000621227 1267 ntBASIC29.52■■■□□ 2.32
RFC2P35250 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC29.51■■■□□ 2.32
RFC2P35250 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.51■■■□□ 2.31
RFC2P35250 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.51■■■□□ 2.31
RFC2P35250 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RFC2P35250 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
RFC2P35250 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
RFC2P35250 HSD17B1P1-201ENST00000590052 955 ntBASIC29.47■■■□□ 2.31
RFC2P35250 CR559946.2-201ENST00000623684 991 ntBASIC29.47■■■□□ 2.31
RFC2P35250 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC29.47■■■□□ 2.31
RFC2P35250 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
RFC2P35250 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
RFC2P35250 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
RFC2P35250 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC29.45■■■□□ 2.31
RFC2P35250 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.31
RFC2P35250 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC29.45■■■□□ 2.31
RFC2P35250 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RFC2P35250 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
RFC2P35250 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC29.43■■■□□ 2.3
RFC2P35250 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
RFC2P35250 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
RFC2P35250 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
RFC2P35250 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.41■■■□□ 2.3
RFC2P35250 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RFC2P35250 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
RFC2P35250 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
RFC2P35250 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.4■■■□□ 2.3
RFC2P35250 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RFC2P35250 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.39■■■□□ 2.3
RFC2P35250 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC29.39■■■□□ 2.3
RFC2P35250 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
RFC2P35250 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
RFC2P35250 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RFC2P35250 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.37■■■□□ 2.29
RFC2P35250 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
RFC2P35250 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.34■■■□□ 2.29
RFC2P35250 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
RFC2P35250 BRD4-212ENST00000630599 726 ntTSL 2 BASIC29.34■■■□□ 2.29
RFC2P35250 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
RFC2P35250 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
RFC2P35250 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
RFC2P35250 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.3■■■□□ 2.28
RFC2P35250 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
RFC2P35250 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
RFC2P35250 ABHD17AP3-201ENST00000503096 1137 ntBASIC29.28■■■□□ 2.28
RFC2P35250 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
RFC2P35250 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC29.27■■■□□ 2.28
RFC2P35250 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
RFC2P35250 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
RFC2P35250 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
RFC2P35250 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
RFC2P35250 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
RFC2P35250 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC29.25■■■□□ 2.27
RFC2P35250 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
RFC2P35250 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC29.23■■■□□ 2.27
RFC2P35250 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
RFC2P35250 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
RFC2P35250 DUX4L13-201ENST00000554103 1267 ntBASIC29.21■■■□□ 2.27
RFC2P35250 DUX4L15-201ENST00000611059 1267 ntBASIC29.21■■■□□ 2.27
RFC2P35250 DUX4L23-201ENST00000615195 1269 ntBASIC29.21■■■□□ 2.27
RFC2P35250 DUX4L24-201ENST00000617576 1269 ntBASIC29.21■■■□□ 2.27
RFC2P35250 DUX4L22-201ENST00000618238 1269 ntBASIC29.21■■■□□ 2.27
RFC2P35250 DUX4L20-201ENST00000619712 1269 ntBASIC29.21■■■□□ 2.27
RFC2P35250 DUX4L21-201ENST00000622058 1269 ntBASIC29.21■■■□□ 2.27
RFC2P35250 DUX4L10-201ENST00000622460 1267 ntBASIC29.21■■■□□ 2.27
RFC2P35250 DUX4L25-201ENST00000624915 1269 ntBASIC29.21■■■□□ 2.27
RFC2P35250 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
RFC2P35250 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.26
RFC2P35250 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
RFC2P35250 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
RFC2P35250 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
RFC2P35250 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC29.2■■■□□ 2.26
RFC2P35250 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.18■■■□□ 2.26
RFC2P35250 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.16■■■□□ 2.26
RFC2P35250 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
RFC2P35250 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
RFC2P35250 METRNL-202ENST00000570778 967 ntTSL 5 BASIC29.15■■■□□ 2.26
RFC2P35250 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC29.15■■■□□ 2.26
RFC2P35250 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC29.14■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms