Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.08■■■□□ 2.57
CTGFP29279 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.07■■■□□ 2.56
CTGFP29279 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.07■■■□□ 2.56
CTGFP29279 AC108673.1-201ENST00000510422 1159 ntBASIC31.07■■■□□ 2.56
CTGFP29279 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
CTGFP29279 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
CTGFP29279 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.04■■■□□ 2.56
CTGFP29279 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.03■■■□□ 2.56
CTGFP29279 LINC01971-201ENST00000617888 1048 ntBASIC31.03■■■□□ 2.56
CTGFP29279 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CTGFP29279 ABHD17AP3-201ENST00000503096 1137 ntBASIC31.02■■■□□ 2.56
CTGFP29279 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
CTGFP29279 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.01■■■□□ 2.56
CTGFP29279 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
CTGFP29279 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
CTGFP29279 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CTGFP29279 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.99■■■□□ 2.55
CTGFP29279 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.99■■■□□ 2.55
CTGFP29279 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CTGFP29279 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CTGFP29279 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
CTGFP29279 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
CTGFP29279 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CTGFP29279 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CTGFP29279 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
CTGFP29279 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CTGFP29279 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CTGFP29279 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.93■■■□□ 2.54
CTGFP29279 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.92■■■□□ 2.54
CTGFP29279 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
CTGFP29279 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
CTGFP29279 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
CTGFP29279 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
CTGFP29279 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
CTGFP29279 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.9■■■□□ 2.54
CTGFP29279 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.9■■■□□ 2.54
CTGFP29279 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CTGFP29279 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
CTGFP29279 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CTGFP29279 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.87■■■□□ 2.53
CTGFP29279 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CTGFP29279 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
CTGFP29279 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
CTGFP29279 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CTGFP29279 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CTGFP29279 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CTGFP29279 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.82■■■□□ 2.52
CTGFP29279 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.81■■■□□ 2.52
CTGFP29279 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CTGFP29279 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CTGFP29279 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.8■■■□□ 2.52
CTGFP29279 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CTGFP29279 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.8■■■□□ 2.52
CTGFP29279 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.8■■■□□ 2.52
CTGFP29279 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.79■■■□□ 2.52
CTGFP29279 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CTGFP29279 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CTGFP29279 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.77■■■□□ 2.52
CTGFP29279 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.77■■■□□ 2.52
CTGFP29279 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.77■■■□□ 2.52
CTGFP29279 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CTGFP29279 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
CTGFP29279 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.75■■■□□ 2.51
CTGFP29279 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CTGFP29279 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CTGFP29279 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CTGFP29279 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.74■■■□□ 2.51
CTGFP29279 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CTGFP29279 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CTGFP29279 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CTGFP29279 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.71■■■□□ 2.51
CTGFP29279 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CTGFP29279 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CTGFP29279 DUX4L13-201ENST00000554103 1267 ntBASIC30.7■■■□□ 2.51
CTGFP29279 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.7■■■□□ 2.51
CTGFP29279 DUX4L15-201ENST00000611059 1267 ntBASIC30.7■■■□□ 2.51
CTGFP29279 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.7■■■□□ 2.51
CTGFP29279 DUX4L23-201ENST00000615195 1269 ntBASIC30.7■■■□□ 2.51
CTGFP29279 DUX4L24-201ENST00000617576 1269 ntBASIC30.7■■■□□ 2.51
CTGFP29279 DUX4L22-201ENST00000618238 1269 ntBASIC30.7■■■□□ 2.51
CTGFP29279 DUX4L20-201ENST00000619712 1269 ntBASIC30.7■■■□□ 2.51
CTGFP29279 DUX4L21-201ENST00000622058 1269 ntBASIC30.7■■■□□ 2.51
CTGFP29279 DUX4L10-201ENST00000622460 1267 ntBASIC30.7■■■□□ 2.51
CTGFP29279 DUX4L25-201ENST00000624915 1269 ntBASIC30.7■■■□□ 2.51
CTGFP29279 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC30.7■■■□□ 2.5
CTGFP29279 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CTGFP29279 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.69■■■□□ 2.5
CTGFP29279 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.69■■■□□ 2.5
CTGFP29279 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
CTGFP29279 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.66■■■□□ 2.5
CTGFP29279 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.66■■■□□ 2.5
CTGFP29279 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CTGFP29279 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CTGFP29279 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.65■■■□□ 2.5
CTGFP29279 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
CTGFP29279 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.64■■■□□ 2.5
CTGFP29279 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
CTGFP29279 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.62■■■□□ 2.49
CTGFP29279 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.61■■■□□ 2.49
CTGFP29279 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.61■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms