Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Pde6bP23440 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.11■■□□□ 1.93
Pde6bP23440 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Pde6bP23440 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
Pde6bP23440 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Pde6bP23440 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Pde6bP23440 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Pde6bP23440 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
Pde6bP23440 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC27.05■■□□□ 1.92
Pde6bP23440 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
Pde6bP23440 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
Pde6bP23440 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Pde6bP23440 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.02■■□□□ 1.92
Pde6bP23440 Gm30346-201ENSMUST00000218641 1699 ntBASIC27.02■■□□□ 1.92
Pde6bP23440 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC27.02■■□□□ 1.92
Pde6bP23440 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
Pde6bP23440 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.01■■□□□ 1.92
Pde6bP23440 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Pde6bP23440 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Pde6bP23440 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC27■■□□□ 1.91
Pde6bP23440 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
Pde6bP23440 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Pde6bP23440 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.99■■□□□ 1.91
Pde6bP23440 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
Pde6bP23440 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Pde6bP23440 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Pde6bP23440 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.98■■□□□ 1.91
Pde6bP23440 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Pde6bP23440 Gm42809-201ENSMUST00000198429 1138 ntBASIC26.96■■□□□ 1.91
Pde6bP23440 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Pde6bP23440 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Pde6bP23440 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
Pde6bP23440 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Pde6bP23440 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Pde6bP23440 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
Pde6bP23440 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.92■■□□□ 1.9
Pde6bP23440 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Pde6bP23440 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
Pde6bP23440 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Pde6bP23440 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Pde6bP23440 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Pde6bP23440 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
Pde6bP23440 Nkain2-201ENSMUST00000092602 558 ntBASIC26.87■■□□□ 1.89
Pde6bP23440 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Pde6bP23440 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Pde6bP23440 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.85■■□□□ 1.89
Pde6bP23440 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Pde6bP23440 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Pde6bP23440 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Pde6bP23440 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pde6bP23440 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
Pde6bP23440 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Pde6bP23440 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Pde6bP23440 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Pde6bP23440 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Pde6bP23440 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Pde6bP23440 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
Pde6bP23440 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Pde6bP23440 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Pde6bP23440 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Pde6bP23440 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.77■■□□□ 1.88
Pde6bP23440 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Pde6bP23440 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Pde6bP23440 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.75■■□□□ 1.87
Pde6bP23440 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Pde6bP23440 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Pde6bP23440 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Pde6bP23440 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Pde6bP23440 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Pde6bP23440 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Pde6bP23440 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Pde6bP23440 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Pde6bP23440 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Pde6bP23440 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC26.71■■□□□ 1.87
Pde6bP23440 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.69■■□□□ 1.86
Pde6bP23440 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.67■■□□□ 1.86
Pde6bP23440 Zxda-201ENSMUST00000117281 2621 ntBASIC26.67■■□□□ 1.86
Pde6bP23440 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Pde6bP23440 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Pde6bP23440 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Pde6bP23440 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Pde6bP23440 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.64■■□□□ 1.86
Pde6bP23440 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Pde6bP23440 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Pde6bP23440 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pde6bP23440 Gm7432-201ENSMUST00000210343 879 ntBASIC26.62■■□□□ 1.85
Pde6bP23440 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Pde6bP23440 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Pde6bP23440 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
Pde6bP23440 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pde6bP23440 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
Pde6bP23440 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Pde6bP23440 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.58■■□□□ 1.85
Pde6bP23440 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Pde6bP23440 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
Pde6bP23440 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.57■■□□□ 1.84
Pde6bP23440 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Pde6bP23440 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.57■■□□□ 1.84
Pde6bP23440 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Pde6bP23440 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26.56■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms