Protein–RNA interactions for Protein: P21841

Sftpc, Pulmonary surfactant-associated protein C, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpcP21841 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
SftpcP21841 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SftpcP21841 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
SftpcP21841 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SftpcP21841 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SftpcP21841 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SftpcP21841 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SftpcP21841 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.08■■□□□ 1.13
SftpcP21841 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SftpcP21841 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SftpcP21841 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.07■■□□□ 1.12
SftpcP21841 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.07■■□□□ 1.12
SftpcP21841 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
SftpcP21841 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SftpcP21841 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SftpcP21841 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SftpcP21841 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SftpcP21841 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SftpcP21841 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.03■■□□□ 1.12
SftpcP21841 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
SftpcP21841 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.01■■□□□ 1.11
SftpcP21841 Gm11599-201ENSMUST00000118720 878 ntBASIC22.01■■□□□ 1.11
SftpcP21841 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
SftpcP21841 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22■■□□□ 1.11
SftpcP21841 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22■■□□□ 1.11
SftpcP21841 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22■■□□□ 1.11
SftpcP21841 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.98■■□□□ 1.11
SftpcP21841 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SftpcP21841 Mir6538-201ENSMUST00000183713 110 ntBASIC21.98■■□□□ 1.11
SftpcP21841 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SftpcP21841 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SftpcP21841 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
SftpcP21841 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.97■■□□□ 1.11
SftpcP21841 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SftpcP21841 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SftpcP21841 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
SftpcP21841 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SftpcP21841 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
SftpcP21841 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SftpcP21841 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.94■■□□□ 1.1
SftpcP21841 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SftpcP21841 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SftpcP21841 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SftpcP21841 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SftpcP21841 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SftpcP21841 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SftpcP21841 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.9■■□□□ 1.1
SftpcP21841 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.9■■□□□ 1.1
SftpcP21841 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SftpcP21841 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SftpcP21841 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.89■■□□□ 1.09
SftpcP21841 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SftpcP21841 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SftpcP21841 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SftpcP21841 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SftpcP21841 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SftpcP21841 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SftpcP21841 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SftpcP21841 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SftpcP21841 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SftpcP21841 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SftpcP21841 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SftpcP21841 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SftpcP21841 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SftpcP21841 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.8■■□□□ 1.08
SftpcP21841 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SftpcP21841 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.8■■□□□ 1.08
SftpcP21841 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SftpcP21841 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SftpcP21841 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SftpcP21841 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SftpcP21841 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SftpcP21841 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SftpcP21841 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SftpcP21841 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SftpcP21841 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.76■■□□□ 1.07
SftpcP21841 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
SftpcP21841 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.75■■□□□ 1.07
SftpcP21841 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.75■■□□□ 1.07
SftpcP21841 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SftpcP21841 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SftpcP21841 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SftpcP21841 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SftpcP21841 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.73■■□□□ 1.07
SftpcP21841 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SftpcP21841 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SftpcP21841 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SftpcP21841 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SftpcP21841 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SftpcP21841 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SftpcP21841 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.71■■□□□ 1.07
SftpcP21841 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SftpcP21841 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
SftpcP21841 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SftpcP21841 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SftpcP21841 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.7■■□□□ 1.06
SftpcP21841 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SftpcP21841 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SftpcP21841 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SftpcP21841 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms