Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
PTPRFP10586 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
PTPRFP10586 AC021231.2-201ENST00000594613 730 ntBASIC31.44■■■□□ 2.62
PTPRFP10586 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
PTPRFP10586 AC108673.1-201ENST00000510422 1159 ntBASIC31.43■■■□□ 2.62
PTPRFP10586 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PTPRFP10586 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.43■■■□□ 2.62
PTPRFP10586 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.42■■■□□ 2.62
PTPRFP10586 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.42■■■□□ 2.62
PTPRFP10586 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
PTPRFP10586 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
PTPRFP10586 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PTPRFP10586 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.4■■■□□ 2.62
PTPRFP10586 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.4■■■□□ 2.62
PTPRFP10586 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
PTPRFP10586 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.39■■■□□ 2.62
PTPRFP10586 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
PTPRFP10586 CR559946.2-201ENST00000623684 991 ntBASIC31.39■■■□□ 2.62
PTPRFP10586 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.39■■■□□ 2.62
PTPRFP10586 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.37■■■□□ 2.61
PTPRFP10586 MIR6090-201ENST00000622481 60 ntBASIC31.37■■■□□ 2.61
PTPRFP10586 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PTPRFP10586 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PTPRFP10586 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.36■■■□□ 2.61
PTPRFP10586 AC016575.1-201ENST00000607026 382 ntBASIC31.35■■■□□ 2.61
PTPRFP10586 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
PTPRFP10586 MIR3648-2-201ENST00000581792 180 ntBASIC31.34■■■□□ 2.61
PTPRFP10586 MIR3648-1-201ENST00000615959 180 ntBASIC31.34■■■□□ 2.61
PTPRFP10586 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
PTPRFP10586 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PTPRFP10586 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.33■■■□□ 2.61
PTPRFP10586 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.33■■■□□ 2.61
PTPRFP10586 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
PTPRFP10586 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
PTPRFP10586 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PTPRFP10586 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.32■■■□□ 2.6
PTPRFP10586 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.32■■■□□ 2.6
PTPRFP10586 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PTPRFP10586 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
PTPRFP10586 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
PTPRFP10586 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PTPRFP10586 MIR639-201ENST00000384974 98 ntBASIC31.3■■■□□ 2.6
PTPRFP10586 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.28■■■□□ 2.6
PTPRFP10586 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
PTPRFP10586 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.27■■■□□ 2.6
PTPRFP10586 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
PTPRFP10586 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
PTPRFP10586 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
PTPRFP10586 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
PTPRFP10586 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.24■■■□□ 2.59
PTPRFP10586 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.24■■■□□ 2.59
PTPRFP10586 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.22■■■□□ 2.59
PTPRFP10586 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.22■■■□□ 2.59
PTPRFP10586 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.2■■■□□ 2.59
PTPRFP10586 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.2■■■□□ 2.59
PTPRFP10586 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PTPRFP10586 LINC01971-201ENST00000617888 1048 ntBASIC31.19■■■□□ 2.58
PTPRFP10586 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
PTPRFP10586 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
PTPRFP10586 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
PTPRFP10586 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.18■■■□□ 2.58
PTPRFP10586 DUX4L11-201ENST00000611504 1267 ntBASIC31.18■■■□□ 2.58
PTPRFP10586 DUX4L12-201ENST00000614593 1267 ntBASIC31.18■■■□□ 2.58
PTPRFP10586 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
PTPRFP10586 DUX4L14-201ENST00000621227 1267 ntBASIC31.18■■■□□ 2.58
PTPRFP10586 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.17■■■□□ 2.58
PTPRFP10586 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PTPRFP10586 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.15■■■□□ 2.58
PTPRFP10586 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.14■■■□□ 2.58
PTPRFP10586 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PTPRFP10586 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PTPRFP10586 AC120057.4-201ENST00000624722 1615 ntBASIC31.12■■■□□ 2.57
PTPRFP10586 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
PTPRFP10586 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
PTPRFP10586 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PTPRFP10586 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.11■■■□□ 2.57
PTPRFP10586 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.11■■■□□ 2.57
PTPRFP10586 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
PTPRFP10586 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.1■■■□□ 2.57
PTPRFP10586 HSD17B1P1-201ENST00000590052 955 ntBASIC31.1■■■□□ 2.57
PTPRFP10586 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PTPRFP10586 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PTPRFP10586 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
PTPRFP10586 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
PTPRFP10586 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PTPRFP10586 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.09■■■□□ 2.57
PTPRFP10586 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
PTPRFP10586 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.08■■■□□ 2.57
PTPRFP10586 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
PTPRFP10586 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
PTPRFP10586 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
PTPRFP10586 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.08■■■□□ 2.57
PTPRFP10586 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PTPRFP10586 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
PTPRFP10586 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PTPRFP10586 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
PTPRFP10586 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
PTPRFP10586 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.02■■■□□ 2.56
PTPRFP10586 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.55
PTPRFP10586 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms