Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
MRPL3P09001 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.83■■□□□ 1.41
MRPL3P09001 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
MRPL3P09001 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.4
MRPL3P09001 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
MRPL3P09001 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC23.82■■□□□ 1.4
MRPL3P09001 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
MRPL3P09001 AP002365.1-201ENST00000603448 772 ntBASIC23.81■■□□□ 1.4
MRPL3P09001 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MRPL3P09001 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
MRPL3P09001 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MRPL3P09001 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.8■■□□□ 1.4
MRPL3P09001 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MRPL3P09001 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MRPL3P09001 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.78■■□□□ 1.4
MRPL3P09001 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
MRPL3P09001 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MRPL3P09001 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
MRPL3P09001 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
MRPL3P09001 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MRPL3P09001 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
MRPL3P09001 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.76■■□□□ 1.39
MRPL3P09001 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
MRPL3P09001 AL135925.1-201ENST00000605920 1701 ntBASIC23.75■■□□□ 1.39
MRPL3P09001 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
MRPL3P09001 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.73■■□□□ 1.39
MRPL3P09001 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.73■■□□□ 1.39
MRPL3P09001 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.72■■□□□ 1.39
MRPL3P09001 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
MRPL3P09001 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.71■■□□□ 1.39
MRPL3P09001 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
MRPL3P09001 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
MRPL3P09001 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
MRPL3P09001 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
MRPL3P09001 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
MRPL3P09001 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
MRPL3P09001 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
MRPL3P09001 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
MRPL3P09001 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
MRPL3P09001 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
MRPL3P09001 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
MRPL3P09001 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
MRPL3P09001 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
MRPL3P09001 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
MRPL3P09001 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
MRPL3P09001 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
MRPL3P09001 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
MRPL3P09001 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
MRPL3P09001 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
MRPL3P09001 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
MRPL3P09001 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
MRPL3P09001 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MRPL3P09001 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MRPL3P09001 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.63■■□□□ 1.37
MRPL3P09001 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MRPL3P09001 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
MRPL3P09001 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
MRPL3P09001 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
MRPL3P09001 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23.61■■□□□ 1.37
MRPL3P09001 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC23.61■■□□□ 1.37
MRPL3P09001 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
MRPL3P09001 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
MRPL3P09001 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
MRPL3P09001 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
MRPL3P09001 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC23.6■■□□□ 1.37
MRPL3P09001 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
MRPL3P09001 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
MRPL3P09001 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
MRPL3P09001 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
MRPL3P09001 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
MRPL3P09001 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC23.59■■□□□ 1.37
MRPL3P09001 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
MRPL3P09001 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
MRPL3P09001 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
MRPL3P09001 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
MRPL3P09001 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
MRPL3P09001 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
MRPL3P09001 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
MRPL3P09001 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
MRPL3P09001 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.56■■□□□ 1.36
MRPL3P09001 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC23.56■■□□□ 1.36
MRPL3P09001 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
MRPL3P09001 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
MRPL3P09001 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.56■■□□□ 1.36
MRPL3P09001 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.56■■□□□ 1.36
MRPL3P09001 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.55■■□□□ 1.36
MRPL3P09001 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MRPL3P09001 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
MRPL3P09001 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.53■■□□□ 1.36
MRPL3P09001 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
MRPL3P09001 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
MRPL3P09001 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
MRPL3P09001 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.52■■□□□ 1.36
MRPL3P09001 WASH5P-204ENST00000632292 975 ntBASIC23.52■■□□□ 1.36
MRPL3P09001 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
MRPL3P09001 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.5■■□□□ 1.35
MRPL3P09001 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
MRPL3P09001 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
MRPL3P09001 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
MRPL3P09001 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms