Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
MT-ND3P03897 ST7-AS1-201ENST00000456775 1889 ntBASIC26.98■■□□□ 1.91
MT-ND3P03897 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.98■■□□□ 1.91
MT-ND3P03897 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.97■■□□□ 1.91
MT-ND3P03897 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
MT-ND3P03897 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
MT-ND3P03897 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
MT-ND3P03897 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
MT-ND3P03897 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.96■■□□□ 1.91
MT-ND3P03897 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
MT-ND3P03897 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
MT-ND3P03897 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
MT-ND3P03897 AL161658.1-201ENST00000623641 1967 ntBASIC26.95■■□□□ 1.91
MT-ND3P03897 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
MT-ND3P03897 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.95■■□□□ 1.9
MT-ND3P03897 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.9
MT-ND3P03897 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.93■■□□□ 1.9
MT-ND3P03897 SETD8P1-201ENST00000623146 1180 ntBASIC26.92■■□□□ 1.9
MT-ND3P03897 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
MT-ND3P03897 AC097358.2-201ENST00000607541 1159 ntBASIC26.9■■□□□ 1.9
MT-ND3P03897 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
MT-ND3P03897 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
MT-ND3P03897 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
MT-ND3P03897 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.88■■□□□ 1.89
MT-ND3P03897 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.88■■□□□ 1.89
MT-ND3P03897 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
MT-ND3P03897 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
MT-ND3P03897 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.87■■□□□ 1.89
MT-ND3P03897 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
MT-ND3P03897 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
MT-ND3P03897 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
MT-ND3P03897 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
MT-ND3P03897 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
MT-ND3P03897 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
MT-ND3P03897 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
MT-ND3P03897 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.83■■□□□ 1.89
MT-ND3P03897 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.83■■□□□ 1.89
MT-ND3P03897 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.82■■□□□ 1.88
MT-ND3P03897 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
MT-ND3P03897 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
MT-ND3P03897 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
MT-ND3P03897 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
MT-ND3P03897 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.81■■□□□ 1.88
MT-ND3P03897 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
MT-ND3P03897 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
MT-ND3P03897 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
MT-ND3P03897 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
MT-ND3P03897 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
MT-ND3P03897 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
MT-ND3P03897 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
MT-ND3P03897 AC136428.2-201ENST00000563187 214 ntBASIC26.77■■□□□ 1.88
MT-ND3P03897 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
MT-ND3P03897 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
MT-ND3P03897 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.76■■□□□ 1.87
MT-ND3P03897 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.76■■□□□ 1.87
MT-ND3P03897 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
MT-ND3P03897 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.76■■□□□ 1.87
MT-ND3P03897 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
MT-ND3P03897 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.75■■□□□ 1.87
MT-ND3P03897 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
MT-ND3P03897 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
MT-ND3P03897 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.73■■□□□ 1.87
MT-ND3P03897 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
MT-ND3P03897 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
MT-ND3P03897 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
MT-ND3P03897 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.87
MT-ND3P03897 AL135925.1-201ENST00000605920 1701 ntBASIC26.7■■□□□ 1.87
MT-ND3P03897 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
MT-ND3P03897 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
MT-ND3P03897 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
MT-ND3P03897 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
MT-ND3P03897 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.67■■□□□ 1.86
MT-ND3P03897 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.66■■□□□ 1.86
MT-ND3P03897 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
MT-ND3P03897 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
MT-ND3P03897 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
MT-ND3P03897 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.66■■□□□ 1.86
MT-ND3P03897 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
MT-ND3P03897 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
MT-ND3P03897 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
MT-ND3P03897 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
MT-ND3P03897 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.64■■□□□ 1.86
MT-ND3P03897 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.64■■□□□ 1.86
MT-ND3P03897 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
MT-ND3P03897 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.64■■□□□ 1.85
MT-ND3P03897 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
MT-ND3P03897 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
MT-ND3P03897 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
MT-ND3P03897 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
MT-ND3P03897 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.61■■□□□ 1.85
MT-ND3P03897 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
MT-ND3P03897 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.6■■□□□ 1.85
MT-ND3P03897 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
MT-ND3P03897 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
MT-ND3P03897 SUZ12P1-203ENST00000578195 985 ntBASIC26.6■■□□□ 1.85
MT-ND3P03897 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
MT-ND3P03897 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
MT-ND3P03897 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
MT-ND3P03897 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
MT-ND3P03897 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms