Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
IghmP01872 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.43■■□□□ 1.34
IghmP01872 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
IghmP01872 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
IghmP01872 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
IghmP01872 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
IghmP01872 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
IghmP01872 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.41■■□□□ 1.34
IghmP01872 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
IghmP01872 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
IghmP01872 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
IghmP01872 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.38■■□□□ 1.33
IghmP01872 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
IghmP01872 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
IghmP01872 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
IghmP01872 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.37■■□□□ 1.33
IghmP01872 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.36■■□□□ 1.33
IghmP01872 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
IghmP01872 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
IghmP01872 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
IghmP01872 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
IghmP01872 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
IghmP01872 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.32
IghmP01872 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
IghmP01872 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
IghmP01872 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
IghmP01872 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
IghmP01872 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
IghmP01872 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
IghmP01872 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
IghmP01872 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.29■■□□□ 1.32
IghmP01872 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
IghmP01872 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
IghmP01872 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.28■■□□□ 1.32
IghmP01872 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.28■■□□□ 1.32
IghmP01872 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
IghmP01872 Gm16148-201ENSMUST00000119653 893 ntBASIC23.26■■□□□ 1.31
IghmP01872 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
IghmP01872 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
IghmP01872 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
IghmP01872 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
IghmP01872 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
IghmP01872 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
IghmP01872 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
IghmP01872 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
IghmP01872 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
IghmP01872 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
IghmP01872 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
IghmP01872 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
IghmP01872 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
IghmP01872 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
IghmP01872 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
IghmP01872 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
IghmP01872 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
IghmP01872 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.19■■□□□ 1.3
IghmP01872 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
IghmP01872 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
IghmP01872 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
IghmP01872 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
IghmP01872 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
IghmP01872 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
IghmP01872 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
IghmP01872 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
IghmP01872 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
IghmP01872 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.14■■□□□ 1.29
IghmP01872 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
IghmP01872 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
IghmP01872 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
IghmP01872 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
IghmP01872 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
IghmP01872 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
IghmP01872 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
IghmP01872 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
IghmP01872 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
IghmP01872 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
IghmP01872 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
IghmP01872 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
IghmP01872 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
IghmP01872 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
IghmP01872 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
IghmP01872 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
IghmP01872 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
IghmP01872 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
IghmP01872 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
IghmP01872 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
IghmP01872 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
IghmP01872 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
IghmP01872 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
IghmP01872 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
IghmP01872 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
IghmP01872 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23■■□□□ 1.27
IghmP01872 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
IghmP01872 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
IghmP01872 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
IghmP01872 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
IghmP01872 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
IghmP01872 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.98■■□□□ 1.27
IghmP01872 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
IghmP01872 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.97■■□□□ 1.27
IghmP01872 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms