Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Hcn1O88704 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Hcn1O88704 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Hcn1O88704 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Hcn1O88704 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Hcn1O88704 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Hcn1O88704 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Hcn1O88704 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Hcn1O88704 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Hcn1O88704 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Hcn1O88704 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Hcn1O88704 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Hcn1O88704 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Hcn1O88704 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Hcn1O88704 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Hcn1O88704 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Hcn1O88704 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
Hcn1O88704 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Hcn1O88704 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Hcn1O88704 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Hcn1O88704 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Hcn1O88704 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Hcn1O88704 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Hcn1O88704 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.34■■□□□ 1.33
Hcn1O88704 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Hcn1O88704 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Hcn1O88704 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Hcn1O88704 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Hcn1O88704 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Hcn1O88704 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Hcn1O88704 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Hcn1O88704 Gm9397-201ENSMUST00000200125 605 ntBASIC23.3■■□□□ 1.32
Hcn1O88704 Gm45855-201ENSMUST00000212546 880 ntBASIC23.3■■□□□ 1.32
Hcn1O88704 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Hcn1O88704 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Hcn1O88704 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.29■■□□□ 1.32
Hcn1O88704 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Hcn1O88704 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.28■■□□□ 1.32
Hcn1O88704 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Hcn1O88704 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.28■■□□□ 1.32
Hcn1O88704 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Hcn1O88704 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.28■■□□□ 1.32
Hcn1O88704 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Hcn1O88704 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
Hcn1O88704 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.31
Hcn1O88704 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.26■■□□□ 1.31
Hcn1O88704 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Hcn1O88704 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Hcn1O88704 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.25■■□□□ 1.31
Hcn1O88704 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
Hcn1O88704 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Hcn1O88704 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Hcn1O88704 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Hcn1O88704 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.23■■□□□ 1.31
Hcn1O88704 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Hcn1O88704 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Hcn1O88704 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Hcn1O88704 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Hcn1O88704 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.2■■□□□ 1.3
Hcn1O88704 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
Hcn1O88704 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Hcn1O88704 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Hcn1O88704 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.17■■□□□ 1.3
Hcn1O88704 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Hcn1O88704 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Hcn1O88704 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.16■■□□□ 1.3
Hcn1O88704 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Hcn1O88704 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Hcn1O88704 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Hcn1O88704 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Hcn1O88704 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Hcn1O88704 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.14■■□□□ 1.29
Hcn1O88704 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Hcn1O88704 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Hcn1O88704 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Hcn1O88704 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Hcn1O88704 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Hcn1O88704 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.11■■□□□ 1.29
Hcn1O88704 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.11■■□□□ 1.29
Hcn1O88704 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Hcn1O88704 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Hcn1O88704 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Hcn1O88704 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Hcn1O88704 Gm24970-201ENSMUST00000175582 82 ntBASIC23.1■■□□□ 1.29
Hcn1O88704 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Hcn1O88704 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Hcn1O88704 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Hcn1O88704 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Hcn1O88704 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Hcn1O88704 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.07■■□□□ 1.28
Hcn1O88704 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Hcn1O88704 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
Hcn1O88704 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Hcn1O88704 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Hcn1O88704 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
Hcn1O88704 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Hcn1O88704 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.04■■□□□ 1.28
Hcn1O88704 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Hcn1O88704 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hcn1O88704 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms