Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24■■□□□ 1.43
ClppO88696 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
ClppO88696 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.98■■□□□ 1.43
ClppO88696 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ClppO88696 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ClppO88696 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ClppO88696 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
ClppO88696 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.96■■□□□ 1.43
ClppO88696 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ClppO88696 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
ClppO88696 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
ClppO88696 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
ClppO88696 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ClppO88696 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ClppO88696 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.92■■□□□ 1.42
ClppO88696 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ClppO88696 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
ClppO88696 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
ClppO88696 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
ClppO88696 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
ClppO88696 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
ClppO88696 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ClppO88696 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
ClppO88696 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ClppO88696 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
ClppO88696 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.86■■□□□ 1.41
ClppO88696 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.85■■□□□ 1.41
ClppO88696 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
ClppO88696 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
ClppO88696 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.84■■□□□ 1.41
ClppO88696 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
ClppO88696 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
ClppO88696 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ClppO88696 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ClppO88696 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ClppO88696 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ClppO88696 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ClppO88696 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ClppO88696 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ClppO88696 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
ClppO88696 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ClppO88696 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ClppO88696 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ClppO88696 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
ClppO88696 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ClppO88696 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
ClppO88696 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.77■■□□□ 1.4
ClppO88696 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ClppO88696 Gm8503-201ENSMUST00000118131 455 ntBASIC23.76■■□□□ 1.39
ClppO88696 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ClppO88696 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
ClppO88696 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ClppO88696 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ClppO88696 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.73■■□□□ 1.39
ClppO88696 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
ClppO88696 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ClppO88696 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ClppO88696 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ClppO88696 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ClppO88696 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.72■■□□□ 1.39
ClppO88696 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.72■■□□□ 1.39
ClppO88696 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ClppO88696 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ClppO88696 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
ClppO88696 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
ClppO88696 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.7■■□□□ 1.38
ClppO88696 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.7■■□□□ 1.38
ClppO88696 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ClppO88696 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
ClppO88696 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
ClppO88696 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
ClppO88696 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
ClppO88696 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ClppO88696 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ClppO88696 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
ClppO88696 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
ClppO88696 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ClppO88696 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ClppO88696 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ClppO88696 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
ClppO88696 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.65■■□□□ 1.38
ClppO88696 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
ClppO88696 Gm6821-201ENSMUST00000107540 542 ntBASIC23.64■■□□□ 1.37
ClppO88696 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ClppO88696 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ClppO88696 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ClppO88696 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
ClppO88696 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ClppO88696 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
ClppO88696 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
ClppO88696 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ClppO88696 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
ClppO88696 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.59■■□□□ 1.37
ClppO88696 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
ClppO88696 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.58■■□□□ 1.37
ClppO88696 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
ClppO88696 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.58■■□□□ 1.36
ClppO88696 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
ClppO88696 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
ClppO88696 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 815.9 ms