Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC29.69■■■□□ 2.34
Slc4a4O88343 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Slc4a4O88343 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
Slc4a4O88343 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
Slc4a4O88343 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC29.68■■■□□ 2.34
Slc4a4O88343 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Slc4a4O88343 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Slc4a4O88343 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Slc4a4O88343 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Slc4a4O88343 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC29.66■■■□□ 2.34
Slc4a4O88343 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
Slc4a4O88343 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Slc4a4O88343 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Slc4a4O88343 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Slc4a4O88343 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Slc4a4O88343 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC29.62■■■□□ 2.33
Slc4a4O88343 Gm6345-201ENSMUST00000180378 1691 ntBASIC29.62■■■□□ 2.33
Slc4a4O88343 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Slc4a4O88343 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC29.61■■■□□ 2.33
Slc4a4O88343 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC29.61■■■□□ 2.33
Slc4a4O88343 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Slc4a4O88343 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
Slc4a4O88343 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
Slc4a4O88343 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Slc4a4O88343 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Slc4a4O88343 AC157572.2-201ENSMUST00000226970 908 ntBASIC29.58■■■□□ 2.33
Slc4a4O88343 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Slc4a4O88343 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Slc4a4O88343 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Slc4a4O88343 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Slc4a4O88343 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
Slc4a4O88343 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Slc4a4O88343 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Slc4a4O88343 AC153504.1-201ENSMUST00000218379 2290 ntBASIC29.54■■■□□ 2.32
Slc4a4O88343 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Slc4a4O88343 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
Slc4a4O88343 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Slc4a4O88343 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Slc4a4O88343 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Slc4a4O88343 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Slc4a4O88343 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Slc4a4O88343 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Slc4a4O88343 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
Slc4a4O88343 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC29.48■■■□□ 2.31
Slc4a4O88343 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29.47■■■□□ 2.31
Slc4a4O88343 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Slc4a4O88343 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Slc4a4O88343 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
Slc4a4O88343 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Slc4a4O88343 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
Slc4a4O88343 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
Slc4a4O88343 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Slc4a4O88343 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Slc4a4O88343 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Slc4a4O88343 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Slc4a4O88343 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Slc4a4O88343 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
Slc4a4O88343 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC29.35■■■□□ 2.29
Slc4a4O88343 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC29.34■■■□□ 2.29
Slc4a4O88343 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Slc4a4O88343 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Slc4a4O88343 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
Slc4a4O88343 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC29.32■■■□□ 2.28
Slc4a4O88343 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Slc4a4O88343 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC29.31■■■□□ 2.28
Slc4a4O88343 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC29.3■■■□□ 2.28
Slc4a4O88343 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
Slc4a4O88343 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Slc4a4O88343 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Slc4a4O88343 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Slc4a4O88343 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Slc4a4O88343 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Slc4a4O88343 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Slc4a4O88343 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Slc4a4O88343 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Slc4a4O88343 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Slc4a4O88343 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC29.21■■■□□ 2.27
Slc4a4O88343 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Slc4a4O88343 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
Slc4a4O88343 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Slc4a4O88343 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Slc4a4O88343 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Slc4a4O88343 Gm9939-201ENSMUST00000067161 1154 ntBASIC29.18■■■□□ 2.26
Slc4a4O88343 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
Slc4a4O88343 Zxda-201ENSMUST00000117281 2621 ntBASIC29.18■■■□□ 2.26
Slc4a4O88343 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
Slc4a4O88343 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Slc4a4O88343 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Slc4a4O88343 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Slc4a4O88343 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Slc4a4O88343 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC29.13■■■□□ 2.25
Slc4a4O88343 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Slc4a4O88343 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Slc4a4O88343 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC29.11■■■□□ 2.25
Slc4a4O88343 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Slc4a4O88343 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Slc4a4O88343 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC29.11■■■□□ 2.25
Slc4a4O88343 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC29.1■■■□□ 2.25
Slc4a4O88343 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
Slc4a4O88343 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms