Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.38■■□□□ 1.17
Pdlim3O70209 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pdlim3O70209 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pdlim3O70209 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Pdlim3O70209 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Pdlim3O70209 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pdlim3O70209 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pdlim3O70209 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Pdlim3O70209 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pdlim3O70209 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pdlim3O70209 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Pdlim3O70209 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.33■■□□□ 1.17
Pdlim3O70209 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pdlim3O70209 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pdlim3O70209 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pdlim3O70209 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pdlim3O70209 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pdlim3O70209 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Pdlim3O70209 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC22.31■■□□□ 1.16
Pdlim3O70209 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pdlim3O70209 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pdlim3O70209 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.3■■□□□ 1.16
Pdlim3O70209 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Pdlim3O70209 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pdlim3O70209 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pdlim3O70209 Peli2-204ENSMUST00000226513 1320 ntBASIC22.29■■□□□ 1.16
Pdlim3O70209 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pdlim3O70209 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.27■■□□□ 1.16
Pdlim3O70209 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Pdlim3O70209 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pdlim3O70209 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pdlim3O70209 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pdlim3O70209 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pdlim3O70209 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Pdlim3O70209 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pdlim3O70209 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pdlim3O70209 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pdlim3O70209 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pdlim3O70209 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pdlim3O70209 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pdlim3O70209 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pdlim3O70209 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pdlim3O70209 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pdlim3O70209 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pdlim3O70209 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.19■■□□□ 1.14
Pdlim3O70209 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
Pdlim3O70209 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pdlim3O70209 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pdlim3O70209 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pdlim3O70209 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.17■■□□□ 1.14
Pdlim3O70209 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Pdlim3O70209 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pdlim3O70209 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pdlim3O70209 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Pdlim3O70209 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pdlim3O70209 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pdlim3O70209 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pdlim3O70209 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
Pdlim3O70209 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pdlim3O70209 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pdlim3O70209 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pdlim3O70209 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.12■■□□□ 1.13
Pdlim3O70209 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pdlim3O70209 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pdlim3O70209 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Pdlim3O70209 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pdlim3O70209 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pdlim3O70209 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Pdlim3O70209 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pdlim3O70209 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.09■■□□□ 1.13
Pdlim3O70209 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Pdlim3O70209 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Pdlim3O70209 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pdlim3O70209 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Pdlim3O70209 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pdlim3O70209 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pdlim3O70209 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pdlim3O70209 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Pdlim3O70209 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pdlim3O70209 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pdlim3O70209 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Pdlim3O70209 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pdlim3O70209 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pdlim3O70209 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pdlim3O70209 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pdlim3O70209 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pdlim3O70209 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pdlim3O70209 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pdlim3O70209 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Pdlim3O70209 Gm26115-201ENSMUST00000175605 87 ntBASIC21.99■■□□□ 1.11
Pdlim3O70209 Gm8109-201ENSMUST00000194076 746 ntBASIC21.99■■□□□ 1.11
Pdlim3O70209 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pdlim3O70209 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.98■■□□□ 1.11
Pdlim3O70209 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pdlim3O70209 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pdlim3O70209 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pdlim3O70209 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pdlim3O70209 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
Pdlim3O70209 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pdlim3O70209 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms