Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
NTN3O00634 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.87■■□□□ 1.73
NTN3O00634 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
NTN3O00634 MIR6090-201ENST00000622481 60 ntBASIC25.87■■□□□ 1.73
NTN3O00634 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.86■■□□□ 1.73
NTN3O00634 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.86■■□□□ 1.73
NTN3O00634 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
NTN3O00634 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
NTN3O00634 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
NTN3O00634 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
NTN3O00634 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.85■■□□□ 1.73
NTN3O00634 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
NTN3O00634 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC25.83■■□□□ 1.72
NTN3O00634 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
NTN3O00634 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.82■■□□□ 1.72
NTN3O00634 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
NTN3O00634 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NTN3O00634 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.81■■□□□ 1.72
NTN3O00634 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NTN3O00634 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.8■■□□□ 1.72
NTN3O00634 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
NTN3O00634 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.8■■□□□ 1.72
NTN3O00634 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.8■■□□□ 1.72
NTN3O00634 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC25.8■■□□□ 1.72
NTN3O00634 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
NTN3O00634 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.79■■□□□ 1.72
NTN3O00634 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
NTN3O00634 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NTN3O00634 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NTN3O00634 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
NTN3O00634 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC25.78■■□□□ 1.72
NTN3O00634 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
NTN3O00634 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
NTN3O00634 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
NTN3O00634 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
NTN3O00634 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
NTN3O00634 MIR639-201ENST00000384974 98 ntBASIC25.73■■□□□ 1.71
NTN3O00634 MIR4449-201ENST00000578365 66 ntBASIC25.73■■□□□ 1.71
NTN3O00634 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
NTN3O00634 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
NTN3O00634 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
NTN3O00634 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
NTN3O00634 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
NTN3O00634 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
NTN3O00634 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.71■■□□□ 1.71
NTN3O00634 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.7■■□□□ 1.7
NTN3O00634 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NTN3O00634 MIR3648-2-201ENST00000581792 180 ntBASIC25.68■■□□□ 1.7
NTN3O00634 MIR3648-1-201ENST00000615959 180 ntBASIC25.68■■□□□ 1.7
NTN3O00634 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
NTN3O00634 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.67■■□□□ 1.7
NTN3O00634 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.67■■□□□ 1.7
NTN3O00634 LINC01971-201ENST00000617888 1048 ntBASIC25.67■■□□□ 1.7
NTN3O00634 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NTN3O00634 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
NTN3O00634 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.65■■□□□ 1.7
NTN3O00634 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
NTN3O00634 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.65■■□□□ 1.7
NTN3O00634 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.64■■□□□ 1.7
NTN3O00634 DUX4L11-201ENST00000611504 1267 ntBASIC25.64■■□□□ 1.7
NTN3O00634 DUX4L12-201ENST00000614593 1267 ntBASIC25.64■■□□□ 1.7
NTN3O00634 DUX4L14-201ENST00000621227 1267 ntBASIC25.64■■□□□ 1.7
NTN3O00634 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
NTN3O00634 AC120057.4-201ENST00000624722 1615 ntBASIC25.63■■□□□ 1.69
NTN3O00634 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
NTN3O00634 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
NTN3O00634 AC016575.1-201ENST00000607026 382 ntBASIC25.63■■□□□ 1.69
NTN3O00634 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
NTN3O00634 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.63■■□□□ 1.69
NTN3O00634 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.62■■□□□ 1.69
NTN3O00634 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.61■■□□□ 1.69
NTN3O00634 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NTN3O00634 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NTN3O00634 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.59■■□□□ 1.69
NTN3O00634 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
NTN3O00634 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.58■■□□□ 1.69
NTN3O00634 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.58■■□□□ 1.69
NTN3O00634 CR559946.2-201ENST00000623684 991 ntBASIC25.58■■□□□ 1.69
NTN3O00634 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.56■■□□□ 1.68
NTN3O00634 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NTN3O00634 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.56■■□□□ 1.68
NTN3O00634 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NTN3O00634 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
NTN3O00634 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NTN3O00634 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
NTN3O00634 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
NTN3O00634 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
NTN3O00634 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
NTN3O00634 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.53■■□□□ 1.68
NTN3O00634 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.53■■□□□ 1.68
NTN3O00634 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
NTN3O00634 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.52■■□□□ 1.68
NTN3O00634 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
NTN3O00634 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
NTN3O00634 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NTN3O00634 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NTN3O00634 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
NTN3O00634 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.49■■□□□ 1.67
NTN3O00634 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
NTN3O00634 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms