Protein–RNA interactions for Protein: O00453

LST1, Leukocyte-specific transcript 1 protein, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LST1O00453 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LST1O00453 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
LST1O00453 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LST1O00453 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LST1O00453 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LST1O00453 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LST1O00453 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LST1O00453 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LST1O00453 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC17.51■□□□□ 0.39
LST1O00453 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LST1O00453 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LST1O00453 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LST1O00453 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LST1O00453 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
LST1O00453 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LST1O00453 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.48■□□□□ 0.39
LST1O00453 ST7-AS1-201ENST00000456775 1889 ntBASIC17.48■□□□□ 0.39
LST1O00453 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LST1O00453 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LST1O00453 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LST1O00453 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
LST1O00453 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LST1O00453 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LST1O00453 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.46■□□□□ 0.39
LST1O00453 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
LST1O00453 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
LST1O00453 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LST1O00453 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LST1O00453 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC17.45■□□□□ 0.38
LST1O00453 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.45■□□□□ 0.38
LST1O00453 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
LST1O00453 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LST1O00453 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LST1O00453 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.43■□□□□ 0.38
LST1O00453 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.42■□□□□ 0.38
LST1O00453 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LST1O00453 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LST1O00453 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LST1O00453 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LST1O00453 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LST1O00453 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LST1O00453 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LST1O00453 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC17.4■□□□□ 0.38
LST1O00453 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LST1O00453 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
LST1O00453 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.39■□□□□ 0.38
LST1O00453 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LST1O00453 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LST1O00453 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LST1O00453 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
LST1O00453 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
LST1O00453 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LST1O00453 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LST1O00453 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LST1O00453 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LST1O00453 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LST1O00453 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LST1O00453 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC17.37■□□□□ 0.37
LST1O00453 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LST1O00453 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LST1O00453 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LST1O00453 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LST1O00453 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.36■□□□□ 0.37
LST1O00453 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LST1O00453 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LST1O00453 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LST1O00453 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LST1O00453 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LST1O00453 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LST1O00453 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LST1O00453 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LST1O00453 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LST1O00453 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LST1O00453 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LST1O00453 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.32■□□□□ 0.36
LST1O00453 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LST1O00453 SNAI3-AS1-204ENST00000567997 2048 ntBASIC17.32■□□□□ 0.36
LST1O00453 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
LST1O00453 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LST1O00453 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LST1O00453 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
LST1O00453 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LST1O00453 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LST1O00453 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LST1O00453 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LST1O00453 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LST1O00453 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LST1O00453 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LST1O00453 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.28■□□□□ 0.36
LST1O00453 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LST1O00453 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LST1O00453 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LST1O00453 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LST1O00453 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LST1O00453 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LST1O00453 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LST1O00453 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LST1O00453 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LST1O00453 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.25■□□□□ 0.35
LST1O00453 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms