Protein–RNA interactions for Protein: L7N2C4

Gm4340, Predicted gene 4340, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4340L7N2C4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Gm4340L7N2C4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Gm4340L7N2C4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30.38■■■□□ 2.45
Gm4340L7N2C4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Gm4340L7N2C4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Gm4340L7N2C4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Gm4340L7N2C4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30.34■■■□□ 2.45
Gm4340L7N2C4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Gm4340L7N2C4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Gm4340L7N2C4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Gm4340L7N2C4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Gm4340L7N2C4 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Gm4340L7N2C4 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Gm4340L7N2C4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.32■■■□□ 2.44
Gm4340L7N2C4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Gm4340L7N2C4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Gm4340L7N2C4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
Gm4340L7N2C4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Gm4340L7N2C4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Gm4340L7N2C4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Gm4340L7N2C4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Gm4340L7N2C4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Gm4340L7N2C4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Gm4340L7N2C4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
Gm4340L7N2C4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Gm4340L7N2C4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Gm4340L7N2C4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
Gm4340L7N2C4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Gm4340L7N2C4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Gm4340L7N2C4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Gm4340L7N2C4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC30.21■■■□□ 2.43
Gm4340L7N2C4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
Gm4340L7N2C4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
Gm4340L7N2C4 Gm9939-201ENSMUST00000067161 1154 ntBASIC30.2■■■□□ 2.43
Gm4340L7N2C4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Gm4340L7N2C4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30.17■■■□□ 2.42
Gm4340L7N2C4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Gm4340L7N2C4 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.16■■■□□ 2.42
Gm4340L7N2C4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Gm4340L7N2C4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Gm4340L7N2C4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
Gm4340L7N2C4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Gm4340L7N2C4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC30.13■■■□□ 2.41
Gm4340L7N2C4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Gm4340L7N2C4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.12■■■□□ 2.41
Gm4340L7N2C4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Gm4340L7N2C4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Gm4340L7N2C4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
Gm4340L7N2C4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Gm4340L7N2C4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
Gm4340L7N2C4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Gm4340L7N2C4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
Gm4340L7N2C4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
Gm4340L7N2C4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30.04■■■□□ 2.4
Gm4340L7N2C4 Gm8503-201ENSMUST00000118131 455 ntBASIC30.04■■■□□ 2.4
Gm4340L7N2C4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Gm4340L7N2C4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
Gm4340L7N2C4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Gm4340L7N2C4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
Gm4340L7N2C4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Gm4340L7N2C4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Gm4340L7N2C4 Gm6821-201ENSMUST00000107540 542 ntBASIC29.99■■■□□ 2.39
Gm4340L7N2C4 Gm42809-201ENSMUST00000198429 1138 ntBASIC29.99■■■□□ 2.39
Gm4340L7N2C4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Gm4340L7N2C4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Gm4340L7N2C4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Gm4340L7N2C4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Gm4340L7N2C4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Gm4340L7N2C4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Gm4340L7N2C4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Gm4340L7N2C4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Gm4340L7N2C4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Gm4340L7N2C4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC29.93■■■□□ 2.38
Gm4340L7N2C4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC29.92■■■□□ 2.38
Gm4340L7N2C4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC29.92■■■□□ 2.38
Gm4340L7N2C4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Gm4340L7N2C4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Gm4340L7N2C4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Gm4340L7N2C4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC29.89■■■□□ 2.38
Gm4340L7N2C4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Gm4340L7N2C4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.38
Gm4340L7N2C4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Gm4340L7N2C4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Gm4340L7N2C4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Gm4340L7N2C4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
Gm4340L7N2C4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC29.86■■■□□ 2.37
Gm4340L7N2C4 Nkain2-201ENSMUST00000092602 558 ntBASIC29.86■■■□□ 2.37
Gm4340L7N2C4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Gm4340L7N2C4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC29.84■■■□□ 2.37
Gm4340L7N2C4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Gm4340L7N2C4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC29.83■■■□□ 2.37
Gm4340L7N2C4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
Gm4340L7N2C4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Gm4340L7N2C4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Gm4340L7N2C4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
Gm4340L7N2C4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Gm4340L7N2C4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Gm4340L7N2C4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Gm4340L7N2C4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Gm4340L7N2C4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC29.76■■■□□ 2.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms