Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC39.2■■■■□ 3.87
Ccdc141E9Q8Q6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC39.19■■■■□ 3.86
Ccdc141E9Q8Q6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC39.19■■■■□ 3.86
Ccdc141E9Q8Q6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC39.19■■■■□ 3.86
Ccdc141E9Q8Q6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC39.19■■■■□ 3.86
Ccdc141E9Q8Q6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC39.18■■■■□ 3.86
Ccdc141E9Q8Q6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC39.17■■■■□ 3.86
Ccdc141E9Q8Q6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC39.17■■■■□ 3.86
Ccdc141E9Q8Q6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC39.16■■■■□ 3.86
Ccdc141E9Q8Q6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC39.15■■■■□ 3.86
Ccdc141E9Q8Q6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC39.15■■■■□ 3.86
Ccdc141E9Q8Q6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC39.14■■■■□ 3.86
Ccdc141E9Q8Q6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC39.14■■■■□ 3.86
Ccdc141E9Q8Q6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC39.13■■■■□ 3.85
Ccdc141E9Q8Q6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC39.12■■■■□ 3.85
Ccdc141E9Q8Q6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC39.11■■■■□ 3.85
Ccdc141E9Q8Q6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC39.09■■■■□ 3.85
Ccdc141E9Q8Q6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC39.08■■■■□ 3.85
Ccdc141E9Q8Q6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC39.07■■■■□ 3.84
Ccdc141E9Q8Q6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC39.05■■■■□ 3.84
Ccdc141E9Q8Q6 Gm30346-201ENSMUST00000218641 1699 ntBASIC39.05■■■■□ 3.84
Ccdc141E9Q8Q6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC39.05■■■■□ 3.84
Ccdc141E9Q8Q6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC39.04■■■■□ 3.84
Ccdc141E9Q8Q6 Gm7432-201ENSMUST00000210343 879 ntBASIC39.04■■■■□ 3.84
Ccdc141E9Q8Q6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC39.03■■■■□ 3.84
Ccdc141E9Q8Q6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC39.02■■■■□ 3.84
Ccdc141E9Q8Q6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC39.02■■■■□ 3.84
Ccdc141E9Q8Q6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC39.01■■■■□ 3.83
Ccdc141E9Q8Q6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
Ccdc141E9Q8Q6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
Ccdc141E9Q8Q6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC39■■■■□ 3.83
Ccdc141E9Q8Q6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
Ccdc141E9Q8Q6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC38.96■■■■□ 3.83
Ccdc141E9Q8Q6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC38.91■■■■□ 3.82
Ccdc141E9Q8Q6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC38.91■■■■□ 3.82
Ccdc141E9Q8Q6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
Ccdc141E9Q8Q6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC38.9■■■■□ 3.82
Ccdc141E9Q8Q6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC38.88■■■■□ 3.81
Ccdc141E9Q8Q6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC38.88■■■■□ 3.81
Ccdc141E9Q8Q6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC38.87■■■■□ 3.81
Ccdc141E9Q8Q6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC38.86■■■■□ 3.81
Ccdc141E9Q8Q6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
Ccdc141E9Q8Q6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC38.85■■■■□ 3.81
Ccdc141E9Q8Q6 Gm11599-201ENSMUST00000118720 878 ntBASIC38.84■■■■□ 3.81
Ccdc141E9Q8Q6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC38.83■■■■□ 3.81
Ccdc141E9Q8Q6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC38.83■■■■□ 3.81
Ccdc141E9Q8Q6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC38.83■■■■□ 3.81
Ccdc141E9Q8Q6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC38.82■■■■□ 3.81
Ccdc141E9Q8Q6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC38.81■■■■□ 3.8
Ccdc141E9Q8Q6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC38.81■■■■□ 3.8
Ccdc141E9Q8Q6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC38.8■■■■□ 3.8
Ccdc141E9Q8Q6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC38.79■■■■□ 3.8
Ccdc141E9Q8Q6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC38.79■■■■□ 3.8
Ccdc141E9Q8Q6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC38.76■■■■□ 3.8
Ccdc141E9Q8Q6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC38.75■■■■□ 3.79
Ccdc141E9Q8Q6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC38.75■■■■□ 3.79
Ccdc141E9Q8Q6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC38.73■■■■□ 3.79
Ccdc141E9Q8Q6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC38.72■■■■□ 3.79
Ccdc141E9Q8Q6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC38.72■■■■□ 3.79
Ccdc141E9Q8Q6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC38.72■■■■□ 3.79
Ccdc141E9Q8Q6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC38.71■■■■□ 3.79
Ccdc141E9Q8Q6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC38.71■■■■□ 3.79
Ccdc141E9Q8Q6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
Ccdc141E9Q8Q6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC38.66■■■■□ 3.78
Ccdc141E9Q8Q6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC38.66■■■■□ 3.78
Ccdc141E9Q8Q6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC38.65■■■■□ 3.78
Ccdc141E9Q8Q6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC38.64■■■■□ 3.78
Ccdc141E9Q8Q6 Mir6538-201ENSMUST00000183713 110 ntBASIC38.63■■■■□ 3.78
Ccdc141E9Q8Q6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.77
Ccdc141E9Q8Q6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC38.63■■■■□ 3.77
Ccdc141E9Q8Q6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC38.62■■■■□ 3.77
Ccdc141E9Q8Q6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC38.62■■■■□ 3.77
Ccdc141E9Q8Q6 Gm11175-201ENSMUST00000116172 543 ntBASIC38.62■■■■□ 3.77
Ccdc141E9Q8Q6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC38.61■■■■□ 3.77
Ccdc141E9Q8Q6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
Ccdc141E9Q8Q6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC38.6■■■■□ 3.77
Ccdc141E9Q8Q6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC38.57■■■■□ 3.76
Ccdc141E9Q8Q6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC38.55■■■■□ 3.76
Ccdc141E9Q8Q6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC38.55■■■■□ 3.76
Ccdc141E9Q8Q6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC38.54■■■■□ 3.76
Ccdc141E9Q8Q6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC38.54■■■■□ 3.76
Ccdc141E9Q8Q6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC38.53■■■■□ 3.76
Ccdc141E9Q8Q6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC38.52■■■■□ 3.76
Ccdc141E9Q8Q6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC38.52■■■■□ 3.76
Ccdc141E9Q8Q6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC38.49■■■■□ 3.75
Ccdc141E9Q8Q6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC38.48■■■■□ 3.75
Ccdc141E9Q8Q6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC38.47■■■■□ 3.75
Ccdc141E9Q8Q6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC38.46■■■■□ 3.75
Ccdc141E9Q8Q6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
Ccdc141E9Q8Q6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC38.45■■■■□ 3.75
Ccdc141E9Q8Q6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC38.45■■■■□ 3.75
Ccdc141E9Q8Q6 Gm2415-204ENSMUST00000190235 2004 ntBASIC38.45■■■■□ 3.75
Ccdc141E9Q8Q6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC38.45■■■■□ 3.75
Ccdc141E9Q8Q6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC38.43■■■■□ 3.74
Ccdc141E9Q8Q6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC38.41■■■■□ 3.74
Ccdc141E9Q8Q6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC38.41■■■■□ 3.74
Ccdc141E9Q8Q6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC38.41■■■■□ 3.74
Ccdc141E9Q8Q6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC38.4■■■■□ 3.74
Ccdc141E9Q8Q6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC38.39■■■■□ 3.74
Ccdc141E9Q8Q6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC38.39■■■■□ 3.74
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms