Protein–RNA interactions for Protein: E9Q236

Abcc4, ATP-binding cassette, sub-family C (CFTR/MRP), member 4, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcc4E9Q236 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Abcc4E9Q236 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.67■■■□□ 2.5
Abcc4E9Q236 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Abcc4E9Q236 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30.66■■■□□ 2.5
Abcc4E9Q236 Gm24970-201ENSMUST00000175582 82 ntBASIC30.65■■■□□ 2.5
Abcc4E9Q236 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Abcc4E9Q236 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Abcc4E9Q236 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC30.62■■■□□ 2.49
Abcc4E9Q236 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Abcc4E9Q236 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Abcc4E9Q236 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30.61■■■□□ 2.49
Abcc4E9Q236 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30.6■■■□□ 2.49
Abcc4E9Q236 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Abcc4E9Q236 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Abcc4E9Q236 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Abcc4E9Q236 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
Abcc4E9Q236 Gm43863-201ENSMUST00000203822 1192 ntBASIC30.57■■■□□ 2.48
Abcc4E9Q236 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Abcc4E9Q236 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
Abcc4E9Q236 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Abcc4E9Q236 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Abcc4E9Q236 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
Abcc4E9Q236 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Abcc4E9Q236 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Abcc4E9Q236 Zxda-201ENSMUST00000117281 2621 ntBASIC30.53■■■□□ 2.48
Abcc4E9Q236 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Abcc4E9Q236 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Abcc4E9Q236 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC30.51■■■□□ 2.48
Abcc4E9Q236 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC30.5■■■□□ 2.47
Abcc4E9Q236 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.49■■■□□ 2.47
Abcc4E9Q236 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
Abcc4E9Q236 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.48■■■□□ 2.47
Abcc4E9Q236 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Abcc4E9Q236 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Abcc4E9Q236 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
Abcc4E9Q236 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC30.46■■■□□ 2.47
Abcc4E9Q236 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Abcc4E9Q236 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC30.45■■■□□ 2.46
Abcc4E9Q236 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Abcc4E9Q236 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Abcc4E9Q236 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Abcc4E9Q236 AC157572.2-201ENSMUST00000226970 908 ntBASIC30.43■■■□□ 2.46
Abcc4E9Q236 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC30.41■■■□□ 2.46
Abcc4E9Q236 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Abcc4E9Q236 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30.41■■■□□ 2.46
Abcc4E9Q236 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
Abcc4E9Q236 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
Abcc4E9Q236 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC30.38■■■□□ 2.45
Abcc4E9Q236 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Abcc4E9Q236 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Abcc4E9Q236 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
Abcc4E9Q236 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Abcc4E9Q236 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Abcc4E9Q236 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30.35■■■□□ 2.45
Abcc4E9Q236 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Abcc4E9Q236 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
Abcc4E9Q236 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC30.33■■■□□ 2.45
Abcc4E9Q236 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
Abcc4E9Q236 Gm43445-201ENSMUST00000198564 2091 ntBASIC30.33■■■□□ 2.45
Abcc4E9Q236 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Abcc4E9Q236 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC30.31■■■□□ 2.44
Abcc4E9Q236 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Abcc4E9Q236 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Abcc4E9Q236 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC30.29■■■□□ 2.44
Abcc4E9Q236 Gm6206-201ENSMUST00000133472 2199 ntBASIC30.29■■■□□ 2.44
Abcc4E9Q236 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Abcc4E9Q236 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Abcc4E9Q236 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Abcc4E9Q236 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Abcc4E9Q236 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Abcc4E9Q236 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Abcc4E9Q236 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Abcc4E9Q236 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC30.24■■■□□ 2.43
Abcc4E9Q236 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Abcc4E9Q236 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC30.23■■■□□ 2.43
Abcc4E9Q236 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Abcc4E9Q236 Gm9905-201ENSMUST00000065740 1845 ntBASIC30.22■■■□□ 2.43
Abcc4E9Q236 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC30.2■■■□□ 2.43
Abcc4E9Q236 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
Abcc4E9Q236 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Abcc4E9Q236 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
Abcc4E9Q236 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Abcc4E9Q236 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Abcc4E9Q236 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Abcc4E9Q236 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Abcc4E9Q236 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Abcc4E9Q236 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Abcc4E9Q236 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Abcc4E9Q236 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Abcc4E9Q236 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC30.14■■■□□ 2.42
Abcc4E9Q236 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Abcc4E9Q236 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30.13■■■□□ 2.41
Abcc4E9Q236 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Abcc4E9Q236 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Abcc4E9Q236 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.11■■■□□ 2.41
Abcc4E9Q236 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Abcc4E9Q236 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Abcc4E9Q236 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Abcc4E9Q236 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Abcc4E9Q236 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30.1■■■□□ 2.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms