Protein–RNA interactions for Protein: A0A1B0GVZ6

MBD3L2B, Methyl-CpG-binding domain protein 3-like 2B, humanhuman

Predicted RBP Predictions only

Length 204 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L2BA0A1B0GVZ6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.2■■□□□ 1.3
MBD3L2BA0A1B0GVZ6 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MBD3L2BA0A1B0GVZ6 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
MBD3L2BA0A1B0GVZ6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
MBD3L2BA0A1B0GVZ6 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
MBD3L2BA0A1B0GVZ6 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
MBD3L2BA0A1B0GVZ6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.17■■□□□ 1.3
MBD3L2BA0A1B0GVZ6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
MBD3L2BA0A1B0GVZ6 AC120057.4-201ENST00000624722 1615 ntBASIC23.17■■□□□ 1.3
MBD3L2BA0A1B0GVZ6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
MBD3L2BA0A1B0GVZ6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
MBD3L2BA0A1B0GVZ6 HLA-V-202ENST00000446817 847 ntBASIC23.16■■□□□ 1.3
MBD3L2BA0A1B0GVZ6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.16■■□□□ 1.3
MBD3L2BA0A1B0GVZ6 AC108673.1-201ENST00000510422 1159 ntBASIC23.16■■□□□ 1.3
MBD3L2BA0A1B0GVZ6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
MBD3L2BA0A1B0GVZ6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
MBD3L2BA0A1B0GVZ6 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
MBD3L2BA0A1B0GVZ6 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC23.15■■□□□ 1.3
MBD3L2BA0A1B0GVZ6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MBD3L2BA0A1B0GVZ6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
MBD3L2BA0A1B0GVZ6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.14■■□□□ 1.29
MBD3L2BA0A1B0GVZ6 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
MBD3L2BA0A1B0GVZ6 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
MBD3L2BA0A1B0GVZ6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
MBD3L2BA0A1B0GVZ6 AC021231.2-201ENST00000594613 730 ntBASIC23.13■■□□□ 1.29
MBD3L2BA0A1B0GVZ6 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MBD3L2BA0A1B0GVZ6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MBD3L2BA0A1B0GVZ6 MIR6090-201ENST00000622481 60 ntBASIC23.12■■□□□ 1.29
MBD3L2BA0A1B0GVZ6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MBD3L2BA0A1B0GVZ6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
MBD3L2BA0A1B0GVZ6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.1■■□□□ 1.29
MBD3L2BA0A1B0GVZ6 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MBD3L2BA0A1B0GVZ6 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.09■■□□□ 1.29
MBD3L2BA0A1B0GVZ6 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.09■■□□□ 1.29
MBD3L2BA0A1B0GVZ6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
MBD3L2BA0A1B0GVZ6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.09■■□□□ 1.29
MBD3L2BA0A1B0GVZ6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
MBD3L2BA0A1B0GVZ6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.08■■□□□ 1.29
MBD3L2BA0A1B0GVZ6 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
MBD3L2BA0A1B0GVZ6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
MBD3L2BA0A1B0GVZ6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
MBD3L2BA0A1B0GVZ6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
MBD3L2BA0A1B0GVZ6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.06■■□□□ 1.28
MBD3L2BA0A1B0GVZ6 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.06■■□□□ 1.28
MBD3L2BA0A1B0GVZ6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
MBD3L2BA0A1B0GVZ6 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
MBD3L2BA0A1B0GVZ6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
MBD3L2BA0A1B0GVZ6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
MBD3L2BA0A1B0GVZ6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.05■■□□□ 1.28
MBD3L2BA0A1B0GVZ6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
MBD3L2BA0A1B0GVZ6 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
MBD3L2BA0A1B0GVZ6 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
MBD3L2BA0A1B0GVZ6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.03■■□□□ 1.28
MBD3L2BA0A1B0GVZ6 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
MBD3L2BA0A1B0GVZ6 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
MBD3L2BA0A1B0GVZ6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
MBD3L2BA0A1B0GVZ6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
MBD3L2BA0A1B0GVZ6 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC23.01■■□□□ 1.27
MBD3L2BA0A1B0GVZ6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
MBD3L2BA0A1B0GVZ6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.98■■□□□ 1.27
MBD3L2BA0A1B0GVZ6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
MBD3L2BA0A1B0GVZ6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC22.98■■□□□ 1.27
MBD3L2BA0A1B0GVZ6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.97■■□□□ 1.27
MBD3L2BA0A1B0GVZ6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.97■■□□□ 1.27
MBD3L2BA0A1B0GVZ6 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MBD3L2BA0A1B0GVZ6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MBD3L2BA0A1B0GVZ6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
MBD3L2BA0A1B0GVZ6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
MBD3L2BA0A1B0GVZ6 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
MBD3L2BA0A1B0GVZ6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
MBD3L2BA0A1B0GVZ6 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
MBD3L2BA0A1B0GVZ6 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
MBD3L2BA0A1B0GVZ6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
MBD3L2BA0A1B0GVZ6 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
MBD3L2BA0A1B0GVZ6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.92■■□□□ 1.26
MBD3L2BA0A1B0GVZ6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.92■■□□□ 1.26
MBD3L2BA0A1B0GVZ6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.92■■□□□ 1.26
MBD3L2BA0A1B0GVZ6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.92■■□□□ 1.26
MBD3L2BA0A1B0GVZ6 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
MBD3L2BA0A1B0GVZ6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
MBD3L2BA0A1B0GVZ6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
MBD3L2BA0A1B0GVZ6 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
MBD3L2BA0A1B0GVZ6 LINC01971-201ENST00000617888 1048 ntBASIC22.89■■□□□ 1.25
MBD3L2BA0A1B0GVZ6 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
MBD3L2BA0A1B0GVZ6 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
MBD3L2BA0A1B0GVZ6 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
MBD3L2BA0A1B0GVZ6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
MBD3L2BA0A1B0GVZ6 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
MBD3L2BA0A1B0GVZ6 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
MBD3L2BA0A1B0GVZ6 AL161658.1-201ENST00000623641 1967 ntBASIC22.87■■□□□ 1.25
MBD3L2BA0A1B0GVZ6 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
MBD3L2BA0A1B0GVZ6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
MBD3L2BA0A1B0GVZ6 DUX4L11-201ENST00000611504 1267 ntBASIC22.86■■□□□ 1.25
MBD3L2BA0A1B0GVZ6 DUX4L12-201ENST00000614593 1267 ntBASIC22.86■■□□□ 1.25
MBD3L2BA0A1B0GVZ6 DUX4L14-201ENST00000621227 1267 ntBASIC22.86■■□□□ 1.25
MBD3L2BA0A1B0GVZ6 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
MBD3L2BA0A1B0GVZ6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.85■■□□□ 1.25
MBD3L2BA0A1B0GVZ6 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
MBD3L2BA0A1B0GVZ6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
MBD3L2BA0A1B0GVZ6 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms