Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Gm6821-201ENSMUST00000107540 542 ntBASIC29.63■■■□□ 2.33
Cfap99A0A140LIX9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC29.63■■■□□ 2.33
Cfap99A0A140LIX9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Cfap99A0A140LIX9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
Cfap99A0A140LIX9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Cfap99A0A140LIX9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
Cfap99A0A140LIX9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Cfap99A0A140LIX9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC29.58■■■□□ 2.33
Cfap99A0A140LIX9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC29.57■■■□□ 2.32
Cfap99A0A140LIX9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Cfap99A0A140LIX9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
Cfap99A0A140LIX9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
Cfap99A0A140LIX9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Cfap99A0A140LIX9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Cfap99A0A140LIX9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Cfap99A0A140LIX9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC29.53■■■□□ 2.32
Cfap99A0A140LIX9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.31
Cfap99A0A140LIX9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC29.5■■■□□ 2.31
Cfap99A0A140LIX9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC29.5■■■□□ 2.31
Cfap99A0A140LIX9 AC157572.2-201ENSMUST00000226970 908 ntBASIC29.5■■■□□ 2.31
Cfap99A0A140LIX9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Cfap99A0A140LIX9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Cfap99A0A140LIX9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
Cfap99A0A140LIX9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Cfap99A0A140LIX9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
Cfap99A0A140LIX9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Cfap99A0A140LIX9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Cfap99A0A140LIX9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Cfap99A0A140LIX9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Cfap99A0A140LIX9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Cfap99A0A140LIX9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC29.46■■■□□ 2.31
Cfap99A0A140LIX9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Cfap99A0A140LIX9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC29.45■■■□□ 2.3
Cfap99A0A140LIX9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
Cfap99A0A140LIX9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
Cfap99A0A140LIX9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Cfap99A0A140LIX9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Cfap99A0A140LIX9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Cfap99A0A140LIX9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
Cfap99A0A140LIX9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Cfap99A0A140LIX9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Cfap99A0A140LIX9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Cfap99A0A140LIX9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
Cfap99A0A140LIX9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Cfap99A0A140LIX9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
Cfap99A0A140LIX9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC29.37■■■□□ 2.29
Cfap99A0A140LIX9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Cfap99A0A140LIX9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Cfap99A0A140LIX9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC29.34■■■□□ 2.29
Cfap99A0A140LIX9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
Cfap99A0A140LIX9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC29.32■■■□□ 2.28
Cfap99A0A140LIX9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC29.32■■■□□ 2.28
Cfap99A0A140LIX9 Zxda-201ENSMUST00000117281 2621 ntBASIC29.3■■■□□ 2.28
Cfap99A0A140LIX9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Cfap99A0A140LIX9 Gm42809-201ENSMUST00000198429 1138 ntBASIC29.29■■■□□ 2.28
Cfap99A0A140LIX9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Cfap99A0A140LIX9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
Cfap99A0A140LIX9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Cfap99A0A140LIX9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
Cfap99A0A140LIX9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Cfap99A0A140LIX9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC29.27■■■□□ 2.28
Cfap99A0A140LIX9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Cfap99A0A140LIX9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Cfap99A0A140LIX9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Cfap99A0A140LIX9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
Cfap99A0A140LIX9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC29.24■■■□□ 2.27
Cfap99A0A140LIX9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Cfap99A0A140LIX9 Gm9905-201ENSMUST00000065740 1845 ntBASIC29.24■■■□□ 2.27
Cfap99A0A140LIX9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Cfap99A0A140LIX9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC29.22■■■□□ 2.27
Cfap99A0A140LIX9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Cfap99A0A140LIX9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Cfap99A0A140LIX9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Cfap99A0A140LIX9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
Cfap99A0A140LIX9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC29.21■■■□□ 2.27
Cfap99A0A140LIX9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Cfap99A0A140LIX9 Gm6345-201ENSMUST00000180378 1691 ntBASIC29.19■■■□□ 2.26
Cfap99A0A140LIX9 Gm6206-201ENSMUST00000133472 2199 ntBASIC29.19■■■□□ 2.26
Cfap99A0A140LIX9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Cfap99A0A140LIX9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC29.18■■■□□ 2.26
Cfap99A0A140LIX9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Cfap99A0A140LIX9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Cfap99A0A140LIX9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC29.17■■■□□ 2.26
Cfap99A0A140LIX9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
Cfap99A0A140LIX9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC29.16■■■□□ 2.26
Cfap99A0A140LIX9 Nkain2-201ENSMUST00000092602 558 ntBASIC29.16■■■□□ 2.26
Cfap99A0A140LIX9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
Cfap99A0A140LIX9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC29.16■■■□□ 2.26
Cfap99A0A140LIX9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
Cfap99A0A140LIX9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC29.15■■■□□ 2.26
Cfap99A0A140LIX9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC29.13■■■□□ 2.25
Cfap99A0A140LIX9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
Cfap99A0A140LIX9 Gm30346-201ENSMUST00000218641 1699 ntBASIC29.12■■■□□ 2.25
Cfap99A0A140LIX9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC29.12■■■□□ 2.25
Cfap99A0A140LIX9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC29.11■■■□□ 2.25
Cfap99A0A140LIX9 Gm43445-201ENSMUST00000198564 2091 ntBASIC29.11■■■□□ 2.25
Cfap99A0A140LIX9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
Cfap99A0A140LIX9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Cfap99A0A140LIX9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Cfap99A0A140LIX9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms