Protein–RNA interactions for Protein: A0A140LIW3

Frmpd3, FERM and PDZ domain-containing 3, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frmpd3A0A140LIW3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
Frmpd3A0A140LIW3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Frmpd3A0A140LIW3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
Frmpd3A0A140LIW3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Frmpd3A0A140LIW3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.09■■■□□ 2.57
Frmpd3A0A140LIW3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC31.09■■■□□ 2.57
Frmpd3A0A140LIW3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Frmpd3A0A140LIW3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Frmpd3A0A140LIW3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Frmpd3A0A140LIW3 Gm11175-201ENSMUST00000116172 543 ntBASIC31.05■■■□□ 2.56
Frmpd3A0A140LIW3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC31.05■■■□□ 2.56
Frmpd3A0A140LIW3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Frmpd3A0A140LIW3 Mir6538-201ENSMUST00000183713 110 ntBASIC31.05■■■□□ 2.56
Frmpd3A0A140LIW3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
Frmpd3A0A140LIW3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Frmpd3A0A140LIW3 Gm11599-201ENSMUST00000118720 878 ntBASIC31.03■■■□□ 2.56
Frmpd3A0A140LIW3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Frmpd3A0A140LIW3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Frmpd3A0A140LIW3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Frmpd3A0A140LIW3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Frmpd3A0A140LIW3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC31.01■■■□□ 2.55
Frmpd3A0A140LIW3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
Frmpd3A0A140LIW3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Frmpd3A0A140LIW3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Frmpd3A0A140LIW3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Frmpd3A0A140LIW3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Frmpd3A0A140LIW3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Frmpd3A0A140LIW3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Frmpd3A0A140LIW3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Frmpd3A0A140LIW3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Frmpd3A0A140LIW3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Frmpd3A0A140LIW3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Frmpd3A0A140LIW3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Frmpd3A0A140LIW3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.89■■■□□ 2.54
Frmpd3A0A140LIW3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Frmpd3A0A140LIW3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC30.88■■■□□ 2.53
Frmpd3A0A140LIW3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC30.88■■■□□ 2.53
Frmpd3A0A140LIW3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
Frmpd3A0A140LIW3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Frmpd3A0A140LIW3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
Frmpd3A0A140LIW3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
Frmpd3A0A140LIW3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Frmpd3A0A140LIW3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Frmpd3A0A140LIW3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC30.82■■■□□ 2.52
Frmpd3A0A140LIW3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Frmpd3A0A140LIW3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Frmpd3A0A140LIW3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC30.82■■■□□ 2.52
Frmpd3A0A140LIW3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC30.82■■■□□ 2.52
Frmpd3A0A140LIW3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Frmpd3A0A140LIW3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Frmpd3A0A140LIW3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
Frmpd3A0A140LIW3 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.8■■■□□ 2.52
Frmpd3A0A140LIW3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
Frmpd3A0A140LIW3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Frmpd3A0A140LIW3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC30.78■■■□□ 2.52
Frmpd3A0A140LIW3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC30.78■■■□□ 2.52
Frmpd3A0A140LIW3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
Frmpd3A0A140LIW3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Frmpd3A0A140LIW3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
Frmpd3A0A140LIW3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC30.74■■■□□ 2.51
Frmpd3A0A140LIW3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Frmpd3A0A140LIW3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Frmpd3A0A140LIW3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Frmpd3A0A140LIW3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Frmpd3A0A140LIW3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Frmpd3A0A140LIW3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
Frmpd3A0A140LIW3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC30.7■■■□□ 2.51
Frmpd3A0A140LIW3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Frmpd3A0A140LIW3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Frmpd3A0A140LIW3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC30.69■■■□□ 2.5
Frmpd3A0A140LIW3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
Frmpd3A0A140LIW3 Cap2-205ENSMUST00000225824 1634 ntBASIC30.67■■■□□ 2.5
Frmpd3A0A140LIW3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Frmpd3A0A140LIW3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Frmpd3A0A140LIW3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
Frmpd3A0A140LIW3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
Frmpd3A0A140LIW3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
Frmpd3A0A140LIW3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC30.63■■■□□ 2.49
Frmpd3A0A140LIW3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Frmpd3A0A140LIW3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Frmpd3A0A140LIW3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC30.6■■■□□ 2.49
Frmpd3A0A140LIW3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC30.6■■■□□ 2.49
Frmpd3A0A140LIW3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Frmpd3A0A140LIW3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC30.59■■■□□ 2.49
Frmpd3A0A140LIW3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC30.56■■■□□ 2.48
Frmpd3A0A140LIW3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Frmpd3A0A140LIW3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Frmpd3A0A140LIW3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
Frmpd3A0A140LIW3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
Frmpd3A0A140LIW3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC30.54■■■□□ 2.48
Frmpd3A0A140LIW3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Frmpd3A0A140LIW3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Frmpd3A0A140LIW3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
Frmpd3A0A140LIW3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Frmpd3A0A140LIW3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC30.49■■■□□ 2.47
Frmpd3A0A140LIW3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
Frmpd3A0A140LIW3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Frmpd3A0A140LIW3 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Frmpd3A0A140LIW3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
Frmpd3A0A140LIW3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 8.9 ms