Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Igkv8-27A0A0G2JF28 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Igkv8-27A0A0G2JF28 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Igkv8-27A0A0G2JF28 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Igkv8-27A0A0G2JF28 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Igkv8-27A0A0G2JF28 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Igkv8-27A0A0G2JF28 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Igkv8-27A0A0G2JF28 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Igkv8-27A0A0G2JF28 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Igkv8-27A0A0G2JF28 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Igkv8-27A0A0G2JF28 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Igkv8-27A0A0G2JF28 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Igkv8-27A0A0G2JF28 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Igkv8-27A0A0G2JF28 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Igkv8-27A0A0G2JF28 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Igkv8-27A0A0G2JF28 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Igkv8-27A0A0G2JF28 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Igkv8-27A0A0G2JF28 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC15.39■□□□□ 0.05
Igkv8-27A0A0G2JF28 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Igkv8-27A0A0G2JF28 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Igkv8-27A0A0G2JF28 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Igkv8-27A0A0G2JF28 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Igkv8-27A0A0G2JF28 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Igkv8-27A0A0G2JF28 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Igkv8-27A0A0G2JF28 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Igkv8-27A0A0G2JF28 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Igkv8-27A0A0G2JF28 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Igkv8-27A0A0G2JF28 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv8-27A0A0G2JF28 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv8-27A0A0G2JF28 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv8-27A0A0G2JF28 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Igkv8-27A0A0G2JF28 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC15.34■□□□□ 0.05
Igkv8-27A0A0G2JF28 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Igkv8-27A0A0G2JF28 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC15.33■□□□□ 0.05
Igkv8-27A0A0G2JF28 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Igkv8-27A0A0G2JF28 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Igkv8-27A0A0G2JF28 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv8-27A0A0G2JF28 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv8-27A0A0G2JF28 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv8-27A0A0G2JF28 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv8-27A0A0G2JF28 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv8-27A0A0G2JF28 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Igkv8-27A0A0G2JF28 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv8-27A0A0G2JF28 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv8-27A0A0G2JF28 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Igkv8-27A0A0G2JF28 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv8-27A0A0G2JF28 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv8-27A0A0G2JF28 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv8-27A0A0G2JF28 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv8-27A0A0G2JF28 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv8-27A0A0G2JF28 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv8-27A0A0G2JF28 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv8-27A0A0G2JF28 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv8-27A0A0G2JF28 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv8-27A0A0G2JF28 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv8-27A0A0G2JF28 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Igkv8-27A0A0G2JF28 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Igkv8-27A0A0G2JF28 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Igkv8-27A0A0G2JF28 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Igkv8-27A0A0G2JF28 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Igkv8-27A0A0G2JF28 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC15.26■□□□□ 0.03
Igkv8-27A0A0G2JF28 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Igkv8-27A0A0G2JF28 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Igkv8-27A0A0G2JF28 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC15.25■□□□□ 0.03
Igkv8-27A0A0G2JF28 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Igkv8-27A0A0G2JF28 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Igkv8-27A0A0G2JF28 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Igkv8-27A0A0G2JF28 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Igkv8-27A0A0G2JF28 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Igkv8-27A0A0G2JF28 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Igkv8-27A0A0G2JF28 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Igkv8-27A0A0G2JF28 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Igkv8-27A0A0G2JF28 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Igkv8-27A0A0G2JF28 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Igkv8-27A0A0G2JF28 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Igkv8-27A0A0G2JF28 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Igkv8-27A0A0G2JF28 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Igkv8-27A0A0G2JF28 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Igkv8-27A0A0G2JF28 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Igkv8-27A0A0G2JF28 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Igkv8-27A0A0G2JF28 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Igkv8-27A0A0G2JF28 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Igkv8-27A0A0G2JF28 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Igkv8-27A0A0G2JF28 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Igkv8-27A0A0G2JF28 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Igkv8-27A0A0G2JF28 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Igkv8-27A0A0G2JF28 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Igkv8-27A0A0G2JF28 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Igkv8-27A0A0G2JF28 AL845457.1-201ENSMUST00000197244 68 ntBASIC15.2■□□□□ 0.02
Igkv8-27A0A0G2JF28 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Igkv8-27A0A0G2JF28 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC15.2■□□□□ 0.02
Igkv8-27A0A0G2JF28 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Igkv8-27A0A0G2JF28 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Igkv8-27A0A0G2JF28 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Igkv8-27A0A0G2JF28 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Igkv8-27A0A0G2JF28 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC15.19■□□□□ 0.02
Igkv8-27A0A0G2JF28 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Igkv8-27A0A0G2JF28 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Igkv8-27A0A0G2JF28 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Igkv8-27A0A0G2JF28 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms