Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
IGHV3-43A0A0B4J1X8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC22.02■■□□□ 1.11
IGHV3-43A0A0B4J1X8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
IGHV3-43A0A0B4J1X8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
IGHV3-43A0A0B4J1X8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC22.01■■□□□ 1.11
IGHV3-43A0A0B4J1X8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
IGHV3-43A0A0B4J1X8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
IGHV3-43A0A0B4J1X8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.99■■□□□ 1.11
IGHV3-43A0A0B4J1X8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
IGHV3-43A0A0B4J1X8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
IGHV3-43A0A0B4J1X8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
IGHV3-43A0A0B4J1X8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.98■■□□□ 1.11
IGHV3-43A0A0B4J1X8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
IGHV3-43A0A0B4J1X8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
IGHV3-43A0A0B4J1X8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
IGHV3-43A0A0B4J1X8 ST7-AS1-201ENST00000456775 1889 ntBASIC21.98■■□□□ 1.11
IGHV3-43A0A0B4J1X8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
IGHV3-43A0A0B4J1X8 ABCB10P3-201ENST00000561950 2166 ntBASIC21.98■■□□□ 1.11
IGHV3-43A0A0B4J1X8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
IGHV3-43A0A0B4J1X8 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
IGHV3-43A0A0B4J1X8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
IGHV3-43A0A0B4J1X8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.96■■□□□ 1.11
IGHV3-43A0A0B4J1X8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
IGHV3-43A0A0B4J1X8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.95■■□□□ 1.11
IGHV3-43A0A0B4J1X8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
IGHV3-43A0A0B4J1X8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
IGHV3-43A0A0B4J1X8 AC139426.1-201ENST00000568218 2529 ntBASIC21.95■■□□□ 1.1
IGHV3-43A0A0B4J1X8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.95■■□□□ 1.1
IGHV3-43A0A0B4J1X8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
IGHV3-43A0A0B4J1X8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
IGHV3-43A0A0B4J1X8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
IGHV3-43A0A0B4J1X8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
IGHV3-43A0A0B4J1X8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
IGHV3-43A0A0B4J1X8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
IGHV3-43A0A0B4J1X8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
IGHV3-43A0A0B4J1X8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
IGHV3-43A0A0B4J1X8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
IGHV3-43A0A0B4J1X8 AL135925.1-201ENST00000605920 1701 ntBASIC21.93■■□□□ 1.1
IGHV3-43A0A0B4J1X8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.93■■□□□ 1.1
IGHV3-43A0A0B4J1X8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
IGHV3-43A0A0B4J1X8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
IGHV3-43A0A0B4J1X8 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.92■■□□□ 1.1
IGHV3-43A0A0B4J1X8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
IGHV3-43A0A0B4J1X8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
IGHV3-43A0A0B4J1X8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
IGHV3-43A0A0B4J1X8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
IGHV3-43A0A0B4J1X8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
IGHV3-43A0A0B4J1X8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
IGHV3-43A0A0B4J1X8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.89■■□□□ 1.09
IGHV3-43A0A0B4J1X8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IGHV3-43A0A0B4J1X8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.88■■□□□ 1.09
IGHV3-43A0A0B4J1X8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IGHV3-43A0A0B4J1X8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
IGHV3-43A0A0B4J1X8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IGHV3-43A0A0B4J1X8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
IGHV3-43A0A0B4J1X8 AC097358.2-201ENST00000607541 1159 ntBASIC21.87■■□□□ 1.09
IGHV3-43A0A0B4J1X8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
IGHV3-43A0A0B4J1X8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
IGHV3-43A0A0B4J1X8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
IGHV3-43A0A0B4J1X8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
IGHV3-43A0A0B4J1X8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.86■■□□□ 1.09
IGHV3-43A0A0B4J1X8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
IGHV3-43A0A0B4J1X8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
IGHV3-43A0A0B4J1X8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
IGHV3-43A0A0B4J1X8 AC136428.2-201ENST00000563187 214 ntBASIC21.85■■□□□ 1.09
IGHV3-43A0A0B4J1X8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
IGHV3-43A0A0B4J1X8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
IGHV3-43A0A0B4J1X8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
IGHV3-43A0A0B4J1X8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
IGHV3-43A0A0B4J1X8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
IGHV3-43A0A0B4J1X8 AL391121.1-201ENST00000607967 1349 ntBASIC21.81■■□□□ 1.08
IGHV3-43A0A0B4J1X8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IGHV3-43A0A0B4J1X8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.81■■□□□ 1.08
IGHV3-43A0A0B4J1X8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
IGHV3-43A0A0B4J1X8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.81■■□□□ 1.08
IGHV3-43A0A0B4J1X8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IGHV3-43A0A0B4J1X8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
IGHV3-43A0A0B4J1X8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.8■■□□□ 1.08
IGHV3-43A0A0B4J1X8 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
IGHV3-43A0A0B4J1X8 CAHM-201ENST00000604200 896 ntBASIC21.8■■□□□ 1.08
IGHV3-43A0A0B4J1X8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.8■■□□□ 1.08
IGHV3-43A0A0B4J1X8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
IGHV3-43A0A0B4J1X8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
IGHV3-43A0A0B4J1X8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
IGHV3-43A0A0B4J1X8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
IGHV3-43A0A0B4J1X8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.78■■□□□ 1.08
IGHV3-43A0A0B4J1X8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
IGHV3-43A0A0B4J1X8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
IGHV3-43A0A0B4J1X8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
IGHV3-43A0A0B4J1X8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
IGHV3-43A0A0B4J1X8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
IGHV3-43A0A0B4J1X8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
IGHV3-43A0A0B4J1X8 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
IGHV3-43A0A0B4J1X8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
IGHV3-43A0A0B4J1X8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
IGHV3-43A0A0B4J1X8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IGHV3-43A0A0B4J1X8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.76■■□□□ 1.07
IGHV3-43A0A0B4J1X8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IGHV3-43A0A0B4J1X8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IGHV3-43A0A0B4J1X8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms