Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv3A0A0A6YYE2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.11■□□□□ 0.65
Trbv3A0A0A6YYE2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Trbv3A0A0A6YYE2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.09■□□□□ 0.65
Trbv3A0A0A6YYE2 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.08■□□□□ 0.65
Trbv3A0A0A6YYE2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trbv3A0A0A6YYE2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv3A0A0A6YYE2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv3A0A0A6YYE2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv3A0A0A6YYE2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Trbv3A0A0A6YYE2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv3A0A0A6YYE2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
Trbv3A0A0A6YYE2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.06■□□□□ 0.64
Trbv3A0A0A6YYE2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv3A0A0A6YYE2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv3A0A0A6YYE2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.05■□□□□ 0.64
Trbv3A0A0A6YYE2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv3A0A0A6YYE2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv3A0A0A6YYE2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv3A0A0A6YYE2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv3A0A0A6YYE2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv3A0A0A6YYE2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv3A0A0A6YYE2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv3A0A0A6YYE2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trbv3A0A0A6YYE2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trbv3A0A0A6YYE2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Trbv3A0A0A6YYE2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv3A0A0A6YYE2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv3A0A0A6YYE2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv3A0A0A6YYE2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Trbv3A0A0A6YYE2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.01■□□□□ 0.63
Trbv3A0A0A6YYE2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv3A0A0A6YYE2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv3A0A0A6YYE2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv3A0A0A6YYE2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv3A0A0A6YYE2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv3A0A0A6YYE2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trbv3A0A0A6YYE2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv3A0A0A6YYE2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trbv3A0A0A6YYE2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv3A0A0A6YYE2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv3A0A0A6YYE2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.97■□□□□ 0.63
Trbv3A0A0A6YYE2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv3A0A0A6YYE2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.96■□□□□ 0.63
Trbv3A0A0A6YYE2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv3A0A0A6YYE2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv3A0A0A6YYE2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv3A0A0A6YYE2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv3A0A0A6YYE2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv3A0A0A6YYE2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv3A0A0A6YYE2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv3A0A0A6YYE2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Trbv3A0A0A6YYE2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv3A0A0A6YYE2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
Trbv3A0A0A6YYE2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv3A0A0A6YYE2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trbv3A0A0A6YYE2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trbv3A0A0A6YYE2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Trbv3A0A0A6YYE2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv3A0A0A6YYE2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv3A0A0A6YYE2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv3A0A0A6YYE2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv3A0A0A6YYE2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Trbv3A0A0A6YYE2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv3A0A0A6YYE2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv3A0A0A6YYE2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.86■□□□□ 0.61
Trbv3A0A0A6YYE2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Trbv3A0A0A6YYE2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trbv3A0A0A6YYE2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv3A0A0A6YYE2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv3A0A0A6YYE2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv3A0A0A6YYE2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv3A0A0A6YYE2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trbv3A0A0A6YYE2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv3A0A0A6YYE2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.81■□□□□ 0.6
Trbv3A0A0A6YYE2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv3A0A0A6YYE2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv3A0A0A6YYE2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.8■□□□□ 0.6
Trbv3A0A0A6YYE2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv3A0A0A6YYE2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Trbv3A0A0A6YYE2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv3A0A0A6YYE2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv3A0A0A6YYE2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv3A0A0A6YYE2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv3A0A0A6YYE2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Trbv3A0A0A6YYE2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trbv3A0A0A6YYE2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv3A0A0A6YYE2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.77■□□□□ 0.6
Trbv3A0A0A6YYE2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv3A0A0A6YYE2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trbv3A0A0A6YYE2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Trbv3A0A0A6YYE2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv3A0A0A6YYE2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Trbv3A0A0A6YYE2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv3A0A0A6YYE2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv3A0A0A6YYE2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv3A0A0A6YYE2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv3A0A0A6YYE2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Trbv3A0A0A6YYE2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv3A0A0A6YYE2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms