Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV26-1A0A087WT03 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV26-1A0A087WT03 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV26-1A0A087WT03 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
TRAV26-1A0A087WT03 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TRAV26-1A0A087WT03 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV26-1A0A087WT03 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TRAV26-1A0A087WT03 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRAV26-1A0A087WT03 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TRAV26-1A0A087WT03 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
TRAV26-1A0A087WT03 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV26-1A0A087WT03 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV26-1A0A087WT03 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV26-1A0A087WT03 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV26-1A0A087WT03 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV26-1A0A087WT03 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TRAV26-1A0A087WT03 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV26-1A0A087WT03 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.89■□□□□ 0.61
TRAV26-1A0A087WT03 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV26-1A0A087WT03 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV26-1A0A087WT03 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV26-1A0A087WT03 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV26-1A0A087WT03 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV26-1A0A087WT03 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TRAV26-1A0A087WT03 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV26-1A0A087WT03 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV26-1A0A087WT03 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV26-1A0A087WT03 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV26-1A0A087WT03 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV26-1A0A087WT03 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV26-1A0A087WT03 DENR-202ENST00000455982 1052 ntTSL 5 BASIC18.85■□□□□ 0.61
TRAV26-1A0A087WT03 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV26-1A0A087WT03 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC18.84■□□□□ 0.61
TRAV26-1A0A087WT03 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
TRAV26-1A0A087WT03 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.83■□□□□ 0.6
TRAV26-1A0A087WT03 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.83■□□□□ 0.6
TRAV26-1A0A087WT03 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV26-1A0A087WT03 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV26-1A0A087WT03 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV26-1A0A087WT03 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.82■□□□□ 0.6
TRAV26-1A0A087WT03 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
TRAV26-1A0A087WT03 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV26-1A0A087WT03 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV26-1A0A087WT03 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV26-1A0A087WT03 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV26-1A0A087WT03 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.81■□□□□ 0.6
TRAV26-1A0A087WT03 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV26-1A0A087WT03 MIR762-201ENST00000390236 83 ntBASIC18.8■□□□□ 0.6
TRAV26-1A0A087WT03 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRAV26-1A0A087WT03 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV26-1A0A087WT03 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC18.79■□□□□ 0.6
TRAV26-1A0A087WT03 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRAV26-1A0A087WT03 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRAV26-1A0A087WT03 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV26-1A0A087WT03 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRAV26-1A0A087WT03 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV26-1A0A087WT03 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.78■□□□□ 0.6
TRAV26-1A0A087WT03 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRAV26-1A0A087WT03 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC18.77■□□□□ 0.6
TRAV26-1A0A087WT03 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC18.77■□□□□ 0.6
TRAV26-1A0A087WT03 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV26-1A0A087WT03 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV26-1A0A087WT03 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.77■□□□□ 0.6
TRAV26-1A0A087WT03 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV26-1A0A087WT03 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV26-1A0A087WT03 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV26-1A0A087WT03 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV26-1A0A087WT03 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV26-1A0A087WT03 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.75■□□□□ 0.59
TRAV26-1A0A087WT03 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV26-1A0A087WT03 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
TRAV26-1A0A087WT03 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV26-1A0A087WT03 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV26-1A0A087WT03 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV26-1A0A087WT03 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.74■□□□□ 0.59
TRAV26-1A0A087WT03 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
TRAV26-1A0A087WT03 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV26-1A0A087WT03 AP006261.1-201ENST00000584783 668 ntBASIC18.74■□□□□ 0.59
TRAV26-1A0A087WT03 AC005559.1-201ENST00000589661 871 ntBASIC18.74■□□□□ 0.59
TRAV26-1A0A087WT03 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV26-1A0A087WT03 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV26-1A0A087WT03 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV26-1A0A087WT03 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV26-1A0A087WT03 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV26-1A0A087WT03 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV26-1A0A087WT03 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV26-1A0A087WT03 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TRAV26-1A0A087WT03 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV26-1A0A087WT03 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV26-1A0A087WT03 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV26-1A0A087WT03 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV26-1A0A087WT03 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV26-1A0A087WT03 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV26-1A0A087WT03 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV26-1A0A087WT03 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV26-1A0A087WT03 MIR3665-201ENST00000578708 105 ntBASIC18.7■□□□□ 0.58
TRAV26-1A0A087WT03 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAV26-1A0A087WT03 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV26-1A0A087WT03 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
TRAV26-1A0A087WT03 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms