Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav13-4-dv7A0A075B6C2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav13-4-dv7A0A075B6C2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav13-4-dv7A0A075B6C2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC16.87■□□□□ 0.29
Trav13-4-dv7A0A075B6C2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13-4-dv7A0A075B6C2 Gm30346-201ENSMUST00000218641 1699 ntBASIC16.87■□□□□ 0.29
Trav13-4-dv7A0A075B6C2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13-4-dv7A0A075B6C2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13-4-dv7A0A075B6C2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13-4-dv7A0A075B6C2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13-4-dv7A0A075B6C2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13-4-dv7A0A075B6C2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13-4-dv7A0A075B6C2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13-4-dv7A0A075B6C2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav13-4-dv7A0A075B6C2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13-4-dv7A0A075B6C2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC16.82■□□□□ 0.28
Trav13-4-dv7A0A075B6C2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav13-4-dv7A0A075B6C2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav13-4-dv7A0A075B6C2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav13-4-dv7A0A075B6C2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13-4-dv7A0A075B6C2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13-4-dv7A0A075B6C2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13-4-dv7A0A075B6C2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13-4-dv7A0A075B6C2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trav13-4-dv7A0A075B6C2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav13-4-dv7A0A075B6C2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trav13-4-dv7A0A075B6C2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav13-4-dv7A0A075B6C2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC16.78■□□□□ 0.28
Trav13-4-dv7A0A075B6C2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Trav13-4-dv7A0A075B6C2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav13-4-dv7A0A075B6C2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.77■□□□□ 0.28
Trav13-4-dv7A0A075B6C2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13-4-dv7A0A075B6C2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13-4-dv7A0A075B6C2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13-4-dv7A0A075B6C2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13-4-dv7A0A075B6C2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13-4-dv7A0A075B6C2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13-4-dv7A0A075B6C2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav13-4-dv7A0A075B6C2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav13-4-dv7A0A075B6C2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav13-4-dv7A0A075B6C2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13-4-dv7A0A075B6C2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13-4-dv7A0A075B6C2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav13-4-dv7A0A075B6C2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Trav13-4-dv7A0A075B6C2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav13-4-dv7A0A075B6C2 Peli2-204ENSMUST00000226513 1320 ntBASIC16.72■□□□□ 0.27
Trav13-4-dv7A0A075B6C2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav13-4-dv7A0A075B6C2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav13-4-dv7A0A075B6C2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav13-4-dv7A0A075B6C2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav13-4-dv7A0A075B6C2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trav13-4-dv7A0A075B6C2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav13-4-dv7A0A075B6C2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav13-4-dv7A0A075B6C2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trav13-4-dv7A0A075B6C2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trav13-4-dv7A0A075B6C2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav13-4-dv7A0A075B6C2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav13-4-dv7A0A075B6C2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav13-4-dv7A0A075B6C2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav13-4-dv7A0A075B6C2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav13-4-dv7A0A075B6C2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13-4-dv7A0A075B6C2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC16.69■□□□□ 0.26
Trav13-4-dv7A0A075B6C2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13-4-dv7A0A075B6C2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13-4-dv7A0A075B6C2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC16.68■□□□□ 0.26
Trav13-4-dv7A0A075B6C2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13-4-dv7A0A075B6C2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav13-4-dv7A0A075B6C2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13-4-dv7A0A075B6C2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13-4-dv7A0A075B6C2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13-4-dv7A0A075B6C2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav13-4-dv7A0A075B6C2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13-4-dv7A0A075B6C2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13-4-dv7A0A075B6C2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Gm8109-201ENSMUST00000194076 746 ntBASIC16.63■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Gm26115-201ENSMUST00000175605 87 ntBASIC16.62■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC16.61■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 99.5 ms