Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Zxda-201ENSMUST00000117281 2621 ntBASIC19.06■□□□□ 0.64
Trav6-4A0A075B6B4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav6-4A0A075B6B4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav6-4A0A075B6B4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Trav6-4A0A075B6B4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.04■□□□□ 0.64
Trav6-4A0A075B6B4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trav6-4A0A075B6B4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav6-4A0A075B6B4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav6-4A0A075B6B4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trav6-4A0A075B6B4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.02■□□□□ 0.64
Trav6-4A0A075B6B4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav6-4A0A075B6B4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav6-4A0A075B6B4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav6-4A0A075B6B4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Trav6-4A0A075B6B4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19■□□□□ 0.63
Trav6-4A0A075B6B4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav6-4A0A075B6B4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.99■□□□□ 0.63
Trav6-4A0A075B6B4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav6-4A0A075B6B4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav6-4A0A075B6B4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav6-4A0A075B6B4 Gm9397-201ENSMUST00000200125 605 ntBASIC18.98■□□□□ 0.63
Trav6-4A0A075B6B4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav6-4A0A075B6B4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav6-4A0A075B6B4 Gm45855-201ENSMUST00000212546 880 ntBASIC18.97■□□□□ 0.63
Trav6-4A0A075B6B4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav6-4A0A075B6B4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav6-4A0A075B6B4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav6-4A0A075B6B4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav6-4A0A075B6B4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav6-4A0A075B6B4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav6-4A0A075B6B4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Trav6-4A0A075B6B4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Trav6-4A0A075B6B4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.93■□□□□ 0.62
Trav6-4A0A075B6B4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.93■□□□□ 0.62
Trav6-4A0A075B6B4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav6-4A0A075B6B4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Trav6-4A0A075B6B4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.92■□□□□ 0.62
Trav6-4A0A075B6B4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6-4A0A075B6B4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6-4A0A075B6B4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6-4A0A075B6B4 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.91■□□□□ 0.62
Trav6-4A0A075B6B4 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.91■□□□□ 0.62
Trav6-4A0A075B6B4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav6-4A0A075B6B4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Trav6-4A0A075B6B4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav6-4A0A075B6B4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav6-4A0A075B6B4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav6-4A0A075B6B4 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.9■□□□□ 0.62
Trav6-4A0A075B6B4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav6-4A0A075B6B4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.9■□□□□ 0.62
Trav6-4A0A075B6B4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.89■□□□□ 0.61
Trav6-4A0A075B6B4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav6-4A0A075B6B4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trav6-4A0A075B6B4 Gm24970-201ENSMUST00000175582 82 ntBASIC18.88■□□□□ 0.61
Trav6-4A0A075B6B4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6-4A0A075B6B4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6-4A0A075B6B4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6-4A0A075B6B4 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.85■□□□□ 0.61
Trav6-4A0A075B6B4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.85■□□□□ 0.61
Trav6-4A0A075B6B4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6-4A0A075B6B4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.84■□□□□ 0.61
Trav6-4A0A075B6B4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6-4A0A075B6B4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6-4A0A075B6B4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Trav6-4A0A075B6B4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav6-4A0A075B6B4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Trav6-4A0A075B6B4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6-4A0A075B6B4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6-4A0A075B6B4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6-4A0A075B6B4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.82■□□□□ 0.6
Trav6-4A0A075B6B4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trav6-4A0A075B6B4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Trav6-4A0A075B6B4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6-4A0A075B6B4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav6-4A0A075B6B4 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.81■□□□□ 0.6
Trav6-4A0A075B6B4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav6-4A0A075B6B4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav6-4A0A075B6B4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.8■□□□□ 0.6
Trav6-4A0A075B6B4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trav6-4A0A075B6B4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav6-4A0A075B6B4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav6-4A0A075B6B4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav6-4A0A075B6B4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Trav6-4A0A075B6B4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.78■□□□□ 0.6
Trav6-4A0A075B6B4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav6-4A0A075B6B4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav6-4A0A075B6B4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav6-4A0A075B6B4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.77■□□□□ 0.6
Trav6-4A0A075B6B4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.77■□□□□ 0.6
Trav6-4A0A075B6B4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav6-4A0A075B6B4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.77■□□□□ 0.59
Trav6-4A0A075B6B4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav6-4A0A075B6B4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav6-4A0A075B6B4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav6-4A0A075B6B4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.74■□□□□ 0.59
Trav6-4A0A075B6B4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6-4A0A075B6B4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.73■□□□□ 0.59
Trav6-4A0A075B6B4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6-4A0A075B6B4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav6-4A0A075B6B4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms