Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav17A0A075B655 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Trav17A0A075B655 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav17A0A075B655 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav17A0A075B655 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav17A0A075B655 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.56■□□□□ 0.72
Trav17A0A075B655 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.54■□□□□ 0.72
Trav17A0A075B655 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav17A0A075B655 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Trav17A0A075B655 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Trav17A0A075B655 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Trav17A0A075B655 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trav17A0A075B655 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav17A0A075B655 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trav17A0A075B655 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.5■□□□□ 0.71
Trav17A0A075B655 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav17A0A075B655 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav17A0A075B655 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav17A0A075B655 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav17A0A075B655 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav17A0A075B655 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav17A0A075B655 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav17A0A075B655 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav17A0A075B655 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav17A0A075B655 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav17A0A075B655 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav17A0A075B655 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav17A0A075B655 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav17A0A075B655 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trav17A0A075B655 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.44■□□□□ 0.7
Trav17A0A075B655 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trav17A0A075B655 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav17A0A075B655 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trav17A0A075B655 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav17A0A075B655 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.41■□□□□ 0.7
Trav17A0A075B655 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav17A0A075B655 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.41■□□□□ 0.7
Trav17A0A075B655 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav17A0A075B655 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.4■□□□□ 0.7
Trav17A0A075B655 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav17A0A075B655 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav17A0A075B655 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav17A0A075B655 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trav17A0A075B655 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav17A0A075B655 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav17A0A075B655 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav17A0A075B655 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav17A0A075B655 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav17A0A075B655 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav17A0A075B655 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav17A0A075B655 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav17A0A075B655 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trav17A0A075B655 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav17A0A075B655 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav17A0A075B655 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.35■□□□□ 0.69
Trav17A0A075B655 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav17A0A075B655 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trav17A0A075B655 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
Trav17A0A075B655 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trav17A0A075B655 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav17A0A075B655 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav17A0A075B655 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav17A0A075B655 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.32■□□□□ 0.68
Trav17A0A075B655 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Trav17A0A075B655 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav17A0A075B655 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav17A0A075B655 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav17A0A075B655 Peli2-204ENSMUST00000226513 1320 ntBASIC19.31■□□□□ 0.68
Trav17A0A075B655 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav17A0A075B655 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.3■□□□□ 0.68
Trav17A0A075B655 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav17A0A075B655 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav17A0A075B655 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.3■□□□□ 0.68
Trav17A0A075B655 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.29■□□□□ 0.68
Trav17A0A075B655 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav17A0A075B655 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav17A0A075B655 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav17A0A075B655 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav17A0A075B655 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Trav17A0A075B655 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trav17A0A075B655 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trav17A0A075B655 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trav17A0A075B655 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav17A0A075B655 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav17A0A075B655 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav17A0A075B655 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav17A0A075B655 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav17A0A075B655 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav17A0A075B655 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav17A0A075B655 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav17A0A075B655 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trav17A0A075B655 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trav17A0A075B655 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trav17A0A075B655 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Trav17A0A075B655 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trav17A0A075B655 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav17A0A075B655 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav17A0A075B655 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav17A0A075B655 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav17A0A075B655 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms