Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav17A0A075B655 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Trav17A0A075B655 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav17A0A075B655 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav17A0A075B655 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav17A0A075B655 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.56■□□□□ 0.72
Trav17A0A075B655 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.54■□□□□ 0.72
Trav17A0A075B655 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav17A0A075B655 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Trav17A0A075B655 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Trav17A0A075B655 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Trav17A0A075B655 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trav17A0A075B655 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav17A0A075B655 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trav17A0A075B655 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.5■□□□□ 0.71
Trav17A0A075B655 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav17A0A075B655 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav17A0A075B655 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav17A0A075B655 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav17A0A075B655 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav17A0A075B655 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav17A0A075B655 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav17A0A075B655 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav17A0A075B655 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav17A0A075B655 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav17A0A075B655 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav17A0A075B655 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav17A0A075B655 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav17A0A075B655 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trav17A0A075B655 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.44■□□□□ 0.7
Trav17A0A075B655 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trav17A0A075B655 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav17A0A075B655 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trav17A0A075B655 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav17A0A075B655 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.41■□□□□ 0.7
Trav17A0A075B655 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav17A0A075B655 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.41■□□□□ 0.7
Trav17A0A075B655 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav17A0A075B655 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.4■□□□□ 0.7
Trav17A0A075B655 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav17A0A075B655 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav17A0A075B655 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav17A0A075B655 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trav17A0A075B655 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav17A0A075B655 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav17A0A075B655 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav17A0A075B655 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav17A0A075B655 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav17A0A075B655 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav17A0A075B655 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav17A0A075B655 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav17A0A075B655 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trav17A0A075B655 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav17A0A075B655 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav17A0A075B655 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.35■□□□□ 0.69
Trav17A0A075B655 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav17A0A075B655 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trav17A0A075B655 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
Trav17A0A075B655 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trav17A0A075B655 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav17A0A075B655 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav17A0A075B655 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav17A0A075B655 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.32■□□□□ 0.68
Trav17A0A075B655 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Trav17A0A075B655 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav17A0A075B655 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav17A0A075B655 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav17A0A075B655 Peli2-204ENSMUST00000226513 1320 ntBASIC19.31■□□□□ 0.68
Trav17A0A075B655 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav17A0A075B655 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.3■□□□□ 0.68
Trav17A0A075B655 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav17A0A075B655 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav17A0A075B655 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.3■□□□□ 0.68
Trav17A0A075B655 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.29■□□□□ 0.68
Trav17A0A075B655 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav17A0A075B655 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav17A0A075B655 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav17A0A075B655 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav17A0A075B655 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Trav17A0A075B655 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trav17A0A075B655 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trav17A0A075B655 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trav17A0A075B655 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav17A0A075B655 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav17A0A075B655 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav17A0A075B655 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav17A0A075B655 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav17A0A075B655 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav17A0A075B655 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav17A0A075B655 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav17A0A075B655 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trav17A0A075B655 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trav17A0A075B655 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trav17A0A075B655 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Trav17A0A075B655 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trav17A0A075B655 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav17A0A075B655 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav17A0A075B655 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav17A0A075B655 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav17A0A075B655 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms