Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trav6-7-dv9A0A075B639 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trav6-7-dv9A0A075B639 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trav6-7-dv9A0A075B639 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trav6-7-dv9A0A075B639 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
Trav6-7-dv9A0A075B639 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Trav6-7-dv9A0A075B639 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trav6-7-dv9A0A075B639 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trav6-7-dv9A0A075B639 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Trav6-7-dv9A0A075B639 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.92■■□□□ 1.1
Trav6-7-dv9A0A075B639 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
Trav6-7-dv9A0A075B639 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Trav6-7-dv9A0A075B639 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trav6-7-dv9A0A075B639 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trav6-7-dv9A0A075B639 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Trav6-7-dv9A0A075B639 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trav6-7-dv9A0A075B639 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trav6-7-dv9A0A075B639 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trav6-7-dv9A0A075B639 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trav6-7-dv9A0A075B639 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trav6-7-dv9A0A075B639 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trav6-7-dv9A0A075B639 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Trav6-7-dv9A0A075B639 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trav6-7-dv9A0A075B639 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.87■■□□□ 1.09
Trav6-7-dv9A0A075B639 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.86■■□□□ 1.09
Trav6-7-dv9A0A075B639 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trav6-7-dv9A0A075B639 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trav6-7-dv9A0A075B639 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
Trav6-7-dv9A0A075B639 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trav6-7-dv9A0A075B639 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Trav6-7-dv9A0A075B639 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trav6-7-dv9A0A075B639 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
Trav6-7-dv9A0A075B639 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Trav6-7-dv9A0A075B639 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Trav6-7-dv9A0A075B639 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trav6-7-dv9A0A075B639 Amer2-203ENSMUST00000225247 2662 ntBASIC21.83■■□□□ 1.09
Trav6-7-dv9A0A075B639 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Trav6-7-dv9A0A075B639 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.83■■□□□ 1.08
Trav6-7-dv9A0A075B639 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Trav6-7-dv9A0A075B639 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trav6-7-dv9A0A075B639 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trav6-7-dv9A0A075B639 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trav6-7-dv9A0A075B639 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.81■■□□□ 1.08
Trav6-7-dv9A0A075B639 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trav6-7-dv9A0A075B639 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trav6-7-dv9A0A075B639 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trav6-7-dv9A0A075B639 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trav6-7-dv9A0A075B639 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.79■■□□□ 1.08
Trav6-7-dv9A0A075B639 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trav6-7-dv9A0A075B639 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trav6-7-dv9A0A075B639 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trav6-7-dv9A0A075B639 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.77■■□□□ 1.08
Trav6-7-dv9A0A075B639 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.76■■□□□ 1.07
Trav6-7-dv9A0A075B639 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trav6-7-dv9A0A075B639 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trav6-7-dv9A0A075B639 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trav6-7-dv9A0A075B639 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trav6-7-dv9A0A075B639 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trav6-7-dv9A0A075B639 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trav6-7-dv9A0A075B639 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trav6-7-dv9A0A075B639 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Trav6-7-dv9A0A075B639 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.73■■□□□ 1.07
Trav6-7-dv9A0A075B639 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trav6-7-dv9A0A075B639 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.71■■□□□ 1.07
Trav6-7-dv9A0A075B639 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trav6-7-dv9A0A075B639 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Trav6-7-dv9A0A075B639 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trav6-7-dv9A0A075B639 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trav6-7-dv9A0A075B639 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Trav6-7-dv9A0A075B639 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trav6-7-dv9A0A075B639 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trav6-7-dv9A0A075B639 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trav6-7-dv9A0A075B639 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trav6-7-dv9A0A075B639 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Trav6-7-dv9A0A075B639 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trav6-7-dv9A0A075B639 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.68■■□□□ 1.06
Trav6-7-dv9A0A075B639 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trav6-7-dv9A0A075B639 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trav6-7-dv9A0A075B639 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Trav6-7-dv9A0A075B639 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trav6-7-dv9A0A075B639 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trav6-7-dv9A0A075B639 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trav6-7-dv9A0A075B639 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.64■■□□□ 1.05
Trav6-7-dv9A0A075B639 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.64■■□□□ 1.05
Trav6-7-dv9A0A075B639 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trav6-7-dv9A0A075B639 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trav6-7-dv9A0A075B639 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trav6-7-dv9A0A075B639 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trav6-7-dv9A0A075B639 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trav6-7-dv9A0A075B639 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trav6-7-dv9A0A075B639 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trav6-7-dv9A0A075B639 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trav6-7-dv9A0A075B639 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav6-7-dv9A0A075B639 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav6-7-dv9A0A075B639 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav6-7-dv9A0A075B639 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav6-7-dv9A0A075B639 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav6-7-dv9A0A075B639 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trav6-7-dv9A0A075B639 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trav6-7-dv9A0A075B639 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms