Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb1S4R1E0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb1S4R1E0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb1S4R1E0 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.73■□□□□ 0.27
H2afb1S4R1E0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb1S4R1E0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
H2afb1S4R1E0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb1S4R1E0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb1S4R1E0 Gm43173-201ENSMUST00000202246 593 ntBASIC16.73■□□□□ 0.27
H2afb1S4R1E0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb1S4R1E0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb1S4R1E0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.73■□□□□ 0.27
H2afb1S4R1E0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb1S4R1E0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
H2afb1S4R1E0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
H2afb1S4R1E0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
H2afb1S4R1E0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
H2afb1S4R1E0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
H2afb1S4R1E0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
H2afb1S4R1E0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
H2afb1S4R1E0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
H2afb1S4R1E0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H2afb1S4R1E0 Gm7860-201ENSMUST00000121190 879 ntBASIC16.72■□□□□ 0.27
H2afb1S4R1E0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H2afb1S4R1E0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.72■□□□□ 0.27
H2afb1S4R1E0 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H2afb1S4R1E0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H2afb1S4R1E0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
H2afb1S4R1E0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H2afb1S4R1E0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
H2afb1S4R1E0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb1S4R1E0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb1S4R1E0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb1S4R1E0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
H2afb1S4R1E0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb1S4R1E0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb1S4R1E0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb1S4R1E0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.71■□□□□ 0.27
H2afb1S4R1E0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb1S4R1E0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb1S4R1E0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
H2afb1S4R1E0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb1S4R1E0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb1S4R1E0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb1S4R1E0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
H2afb1S4R1E0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb1S4R1E0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb1S4R1E0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb1S4R1E0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb1S4R1E0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb1S4R1E0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb1S4R1E0 Gm27454-201ENSMUST00000185090 204 ntBASIC16.7■□□□□ 0.26
H2afb1S4R1E0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.7■□□□□ 0.26
H2afb1S4R1E0 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb1S4R1E0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
H2afb1S4R1E0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
H2afb1S4R1E0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb1S4R1E0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb1S4R1E0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb1S4R1E0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb1S4R1E0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2afb1S4R1E0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2afb1S4R1E0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2afb1S4R1E0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
H2afb1S4R1E0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2afb1S4R1E0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
H2afb1S4R1E0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.69■□□□□ 0.26
H2afb1S4R1E0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2afb1S4R1E0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2afb1S4R1E0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
H2afb1S4R1E0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb1S4R1E0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb1S4R1E0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
H2afb1S4R1E0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.68■□□□□ 0.26
H2afb1S4R1E0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb1S4R1E0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.68■□□□□ 0.26
H2afb1S4R1E0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb1S4R1E0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.68■□□□□ 0.26
H2afb1S4R1E0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
H2afb1S4R1E0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
H2afb1S4R1E0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb1S4R1E0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
H2afb1S4R1E0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb1S4R1E0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb1S4R1E0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb1S4R1E0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb1S4R1E0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb1S4R1E0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb1S4R1E0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.67■□□□□ 0.26
H2afb1S4R1E0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb1S4R1E0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb1S4R1E0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb1S4R1E0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb1S4R1E0 Gm26833-201ENSMUST00000180899 440 ntBASIC16.67■□□□□ 0.26
H2afb1S4R1E0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb1S4R1E0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb1S4R1E0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
H2afb1S4R1E0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.66■□□□□ 0.26
H2afb1S4R1E0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
H2afb1S4R1E0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms