Protein–RNA interactions for Protein: Q9R013

Ctsf, Cathepsin F, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtsfQ9R013 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CtsfQ9R013 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CtsfQ9R013 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CtsfQ9R013 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.01■□□□□ 0.79
CtsfQ9R013 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CtsfQ9R013 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CtsfQ9R013 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.01■□□□□ 0.79
CtsfQ9R013 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CtsfQ9R013 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CtsfQ9R013 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CtsfQ9R013 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CtsfQ9R013 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CtsfQ9R013 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CtsfQ9R013 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CtsfQ9R013 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CtsfQ9R013 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CtsfQ9R013 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20■□□□□ 0.79
CtsfQ9R013 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20■□□□□ 0.79
CtsfQ9R013 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CtsfQ9R013 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CtsfQ9R013 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CtsfQ9R013 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CtsfQ9R013 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CtsfQ9R013 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CtsfQ9R013 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CtsfQ9R013 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CtsfQ9R013 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.99■□□□□ 0.79
CtsfQ9R013 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CtsfQ9R013 Gm44549-201ENSMUST00000208351 577 ntBASIC19.99■□□□□ 0.79
CtsfQ9R013 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CtsfQ9R013 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.99■□□□□ 0.79
CtsfQ9R013 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CtsfQ9R013 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CtsfQ9R013 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.98■□□□□ 0.79
CtsfQ9R013 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CtsfQ9R013 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CtsfQ9R013 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.98■□□□□ 0.79
CtsfQ9R013 Mir6982-201ENSMUST00000184354 68 ntBASIC19.98■□□□□ 0.79
CtsfQ9R013 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.98■□□□□ 0.79
CtsfQ9R013 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CtsfQ9R013 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CtsfQ9R013 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CtsfQ9R013 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CtsfQ9R013 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.97■□□□□ 0.79
CtsfQ9R013 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CtsfQ9R013 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CtsfQ9R013 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CtsfQ9R013 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CtsfQ9R013 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.97■□□□□ 0.79
CtsfQ9R013 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CtsfQ9R013 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CtsfQ9R013 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.97■□□□□ 0.79
CtsfQ9R013 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CtsfQ9R013 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CtsfQ9R013 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CtsfQ9R013 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CtsfQ9R013 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CtsfQ9R013 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CtsfQ9R013 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.96■□□□□ 0.79
CtsfQ9R013 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.96■□□□□ 0.79
CtsfQ9R013 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CtsfQ9R013 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CtsfQ9R013 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CtsfQ9R013 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CtsfQ9R013 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CtsfQ9R013 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CtsfQ9R013 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CtsfQ9R013 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CtsfQ9R013 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CtsfQ9R013 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CtsfQ9R013 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CtsfQ9R013 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CtsfQ9R013 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.95■□□□□ 0.78
CtsfQ9R013 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CtsfQ9R013 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CtsfQ9R013 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CtsfQ9R013 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.95■□□□□ 0.78
CtsfQ9R013 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CtsfQ9R013 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CtsfQ9R013 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CtsfQ9R013 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CtsfQ9R013 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.95■□□□□ 0.78
CtsfQ9R013 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CtsfQ9R013 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CtsfQ9R013 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CtsfQ9R013 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CtsfQ9R013 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CtsfQ9R013 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.94■□□□□ 0.78
CtsfQ9R013 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CtsfQ9R013 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
CtsfQ9R013 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CtsfQ9R013 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CtsfQ9R013 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CtsfQ9R013 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CtsfQ9R013 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.93■□□□□ 0.78
CtsfQ9R013 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CtsfQ9R013 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CtsfQ9R013 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CtsfQ9R013 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
CtsfQ9R013 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms