Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf138Q9CQE0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rnf138Q9CQE0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Rnf138Q9CQE0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.32■□□□□ 0.36
Rnf138Q9CQE0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf138Q9CQE0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf138Q9CQE0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf138Q9CQE0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf138Q9CQE0 Gm10698-201ENSMUST00000182663 604 ntBASIC17.32■□□□□ 0.36
Rnf138Q9CQE0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf138Q9CQE0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rnf138Q9CQE0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf138Q9CQE0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf138Q9CQE0 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.31■□□□□ 0.36
Rnf138Q9CQE0 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.31■□□□□ 0.36
Rnf138Q9CQE0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf138Q9CQE0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.31■□□□□ 0.36
Rnf138Q9CQE0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.31■□□□□ 0.36
Rnf138Q9CQE0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.31■□□□□ 0.36
Rnf138Q9CQE0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.31■□□□□ 0.36
Rnf138Q9CQE0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf138Q9CQE0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.31■□□□□ 0.36
Rnf138Q9CQE0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rnf138Q9CQE0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.31■□□□□ 0.36
Rnf138Q9CQE0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf138Q9CQE0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf138Q9CQE0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf138Q9CQE0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf138Q9CQE0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rnf138Q9CQE0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf138Q9CQE0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf138Q9CQE0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf138Q9CQE0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf138Q9CQE0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf138Q9CQE0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rnf138Q9CQE0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.3■□□□□ 0.36
Rnf138Q9CQE0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.3■□□□□ 0.36
Rnf138Q9CQE0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf138Q9CQE0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf138Q9CQE0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf138Q9CQE0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.3■□□□□ 0.36
Rnf138Q9CQE0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf138Q9CQE0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf138Q9CQE0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.29■□□□□ 0.36
Rnf138Q9CQE0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf138Q9CQE0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf138Q9CQE0 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.29■□□□□ 0.36
Rnf138Q9CQE0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf138Q9CQE0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf138Q9CQE0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf138Q9CQE0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.29■□□□□ 0.36
Rnf138Q9CQE0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf138Q9CQE0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf138Q9CQE0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf138Q9CQE0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf138Q9CQE0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf138Q9CQE0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf138Q9CQE0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf138Q9CQE0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf138Q9CQE0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf138Q9CQE0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf138Q9CQE0 Gm10812-201ENSMUST00000099864 546 ntBASIC17.28■□□□□ 0.36
Rnf138Q9CQE0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf138Q9CQE0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf138Q9CQE0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf138Q9CQE0 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.28■□□□□ 0.36
Rnf138Q9CQE0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf138Q9CQE0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.28■□□□□ 0.36
Rnf138Q9CQE0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf138Q9CQE0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf138Q9CQE0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf138Q9CQE0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Rnf138Q9CQE0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.27■□□□□ 0.36
Rnf138Q9CQE0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.27■□□□□ 0.36
Rnf138Q9CQE0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.27■□□□□ 0.36
Rnf138Q9CQE0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.27■□□□□ 0.36
Rnf138Q9CQE0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf138Q9CQE0 Mtag2-201ENSMUST00000058665 714 ntBASIC17.27■□□□□ 0.36
Rnf138Q9CQE0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Rnf138Q9CQE0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf138Q9CQE0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.27■□□□□ 0.35
Rnf138Q9CQE0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf138Q9CQE0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf138Q9CQE0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf138Q9CQE0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Rnf138Q9CQE0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf138Q9CQE0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf138Q9CQE0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.26■□□□□ 0.35
Rnf138Q9CQE0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf138Q9CQE0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf138Q9CQE0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rnf138Q9CQE0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rnf138Q9CQE0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf138Q9CQE0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf138Q9CQE0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf138Q9CQE0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rnf138Q9CQE0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf138Q9CQE0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf138Q9CQE0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf138Q9CQE0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms