Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.09■■□□□ 1.29
TRIM43Q96BQ3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM43Q96BQ3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM43Q96BQ3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
TRIM43Q96BQ3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC23.09■■□□□ 1.29
TRIM43Q96BQ3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM43Q96BQ3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.09■■□□□ 1.29
TRIM43Q96BQ3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM43Q96BQ3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.08■■□□□ 1.29
TRIM43Q96BQ3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM43Q96BQ3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.08■■□□□ 1.29
TRIM43Q96BQ3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC23.08■■□□□ 1.29
TRIM43Q96BQ3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM43Q96BQ3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM43Q96BQ3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.29
TRIM43Q96BQ3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.08■■□□□ 1.29
TRIM43Q96BQ3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC23.08■■□□□ 1.29
TRIM43Q96BQ3 FAM21FP-204ENST00000608637 956 ntBASIC23.08■■□□□ 1.29
TRIM43Q96BQ3 AC100791.3-201ENST00000617619 330 ntBASIC23.08■■□□□ 1.29
TRIM43Q96BQ3 AC092368.3-202ENST00000574180 1591 ntBASIC23.08■■□□□ 1.29
TRIM43Q96BQ3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM43Q96BQ3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
TRIM43Q96BQ3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
TRIM43Q96BQ3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM43Q96BQ3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM43Q96BQ3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM43Q96BQ3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM43Q96BQ3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM43Q96BQ3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.07■■□□□ 1.28
TRIM43Q96BQ3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM43Q96BQ3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM43Q96BQ3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.07■■□□□ 1.28
TRIM43Q96BQ3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC23.07■■□□□ 1.28
TRIM43Q96BQ3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM43Q96BQ3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
TRIM43Q96BQ3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM43Q96BQ3 AC069544.1-201ENST00000609399 999 ntBASIC23.07■■□□□ 1.28
TRIM43Q96BQ3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM43Q96BQ3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM43Q96BQ3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM43Q96BQ3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.06■■□□□ 1.28
TRIM43Q96BQ3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.06■■□□□ 1.28
TRIM43Q96BQ3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC23.06■■□□□ 1.28
TRIM43Q96BQ3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.06■■□□□ 1.28
TRIM43Q96BQ3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM43Q96BQ3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
TRIM43Q96BQ3 AC091799.1-201ENST00000422823 811 ntBASIC23.06■■□□□ 1.28
TRIM43Q96BQ3 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.06■■□□□ 1.28
TRIM43Q96BQ3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC23.06■■□□□ 1.28
TRIM43Q96BQ3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM43Q96BQ3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM43Q96BQ3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC23.06■■□□□ 1.28
TRIM43Q96BQ3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.05■■□□□ 1.28
TRIM43Q96BQ3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM43Q96BQ3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM43Q96BQ3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM43Q96BQ3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC23.05■■□□□ 1.28
TRIM43Q96BQ3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM43Q96BQ3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC23.05■■□□□ 1.28
TRIM43Q96BQ3 SOX15-203ENST00000570788 1093 ntBASIC23.05■■□□□ 1.28
TRIM43Q96BQ3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC23.05■■□□□ 1.28
TRIM43Q96BQ3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.04■■□□□ 1.28
TRIM43Q96BQ3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.04■■□□□ 1.28
TRIM43Q96BQ3 AL589743.5-201ENST00000616611 1050 ntBASIC23.04■■□□□ 1.28
TRIM43Q96BQ3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM43Q96BQ3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.04■■□□□ 1.28
TRIM43Q96BQ3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
TRIM43Q96BQ3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM43Q96BQ3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.03■■□□□ 1.28
TRIM43Q96BQ3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM43Q96BQ3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM43Q96BQ3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM43Q96BQ3 ABHD17AP6-201ENST00000458502 1044 ntBASIC23.03■■□□□ 1.28
TRIM43Q96BQ3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM43Q96BQ3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.03■■□□□ 1.28
TRIM43Q96BQ3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.03■■□□□ 1.28
TRIM43Q96BQ3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.03■■□□□ 1.28
TRIM43Q96BQ3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
TRIM43Q96BQ3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.03■■□□□ 1.28
TRIM43Q96BQ3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM43Q96BQ3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
TRIM43Q96BQ3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
TRIM43Q96BQ3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.02■■□□□ 1.28
TRIM43Q96BQ3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM43Q96BQ3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
TRIM43Q96BQ3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM43Q96BQ3 TSPY7P-201ENST00000431358 1114 ntBASIC23.02■■□□□ 1.28
TRIM43Q96BQ3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM43Q96BQ3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.02■■□□□ 1.28
TRIM43Q96BQ3 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.02■■□□□ 1.28
TRIM43Q96BQ3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC23.02■■□□□ 1.28
TRIM43Q96BQ3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC23.02■■□□□ 1.28
TRIM43Q96BQ3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC23.02■■□□□ 1.28
TRIM43Q96BQ3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC23.02■■□□□ 1.28
TRIM43Q96BQ3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM43Q96BQ3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.02■■□□□ 1.28
TRIM43Q96BQ3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM43Q96BQ3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM43Q96BQ3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.01■■□□□ 1.27
TRIM43Q96BQ3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms