Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHCHD1Q96BP2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC15.33■□□□□ 0.04
CHCHD1Q96BP2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CHCHD1Q96BP2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHCHD1Q96BP2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHCHD1Q96BP2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHCHD1Q96BP2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC15.33■□□□□ 0.04
CHCHD1Q96BP2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHCHD1Q96BP2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHCHD1Q96BP2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CHCHD1Q96BP2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHCHD1Q96BP2 TNXA-203ENST00000507684 2038 ntBASIC15.33■□□□□ 0.04
CHCHD1Q96BP2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHCHD1Q96BP2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHCHD1Q96BP2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CHCHD1Q96BP2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
CHCHD1Q96BP2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHCHD1Q96BP2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHCHD1Q96BP2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC15.32■□□□□ 0.04
CHCHD1Q96BP2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHCHD1Q96BP2 AC026471.6-201ENST00000622954 1905 ntBASIC15.32■□□□□ 0.04
CHCHD1Q96BP2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHCHD1Q96BP2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.32■□□□□ 0.04
CHCHD1Q96BP2 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHCHD1Q96BP2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC15.32■□□□□ 0.04
CHCHD1Q96BP2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CHCHD1Q96BP2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CHCHD1Q96BP2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHCHD1Q96BP2 LETM1P2-201ENST00000597330 2178 ntBASIC15.32■□□□□ 0.04
CHCHD1Q96BP2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHCHD1Q96BP2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
CHCHD1Q96BP2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC15.32■□□□□ 0.04
CHCHD1Q96BP2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.32■□□□□ 0.04
CHCHD1Q96BP2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHCHD1Q96BP2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHCHD1Q96BP2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CHCHD1Q96BP2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHCHD1Q96BP2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHCHD1Q96BP2 AC027702.1-201ENST00000563810 1770 ntBASIC15.31■□□□□ 0.04
CHCHD1Q96BP2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.31■□□□□ 0.04
CHCHD1Q96BP2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.31■□□□□ 0.04
CHCHD1Q96BP2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHCHD1Q96BP2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHCHD1Q96BP2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHCHD1Q96BP2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHCHD1Q96BP2 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHCHD1Q96BP2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHCHD1Q96BP2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CHCHD1Q96BP2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHCHD1Q96BP2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHCHD1Q96BP2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHCHD1Q96BP2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.3■□□□□ 0.04
CHCHD1Q96BP2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHCHD1Q96BP2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHCHD1Q96BP2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHCHD1Q96BP2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CHCHD1Q96BP2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHCHD1Q96BP2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHCHD1Q96BP2 AC026471.1-201ENST00000564629 3026 ntBASIC15.3■□□□□ 0.04
CHCHD1Q96BP2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHCHD1Q96BP2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHCHD1Q96BP2 AC116562.4-201ENST00000641316 2276 ntBASIC15.3■□□□□ 0.04
CHCHD1Q96BP2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CHCHD1Q96BP2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CHCHD1Q96BP2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHCHD1Q96BP2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 AC004448.1-201ENST00000458332 883 ntBASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 HES4-204ENST00000484667 667 ntTSL 3 BASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.29■□□□□ 0.04
CHCHD1Q96BP2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHCHD1Q96BP2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHCHD1Q96BP2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHCHD1Q96BP2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHCHD1Q96BP2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHCHD1Q96BP2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC15.28■□□□□ 0.04
CHCHD1Q96BP2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
CHCHD1Q96BP2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms